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来自南极跳虫南极隐爪螨的一种新型冷活性β-1,4-D-甘露聚糖酶在279 K下的表达、纯化、结晶及初步X射线晶体学分析

Expression at 279 K, purification, crystallization and preliminary X-ray crystallographic analysis of a novel cold-active β-1,4-D-mannanase from the Antarctic springtail Cryptopygus antarcticus.

作者信息

Kim Min-Kyu, An Young Jun, Jeong Chang-Sook, Song Jung Min, Kang Mee Hye, Lee Youn-Ho, Cha Sun-Shin

机构信息

Marine Biotechnology Research Division, Korea Institute of Ocean Science and Technology, Ansan 426-744, Republic of Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Sep;69(Pt 9):1007-10. doi: 10.1107/S1744309113020538. Epub 2013 Aug 19.

DOI:10.1107/S1744309113020538
PMID:23989150
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3758150/
Abstract

The CaMan gene product from Cryptopygus antarcticus, which belongs to the glycoside hydrolase family 5 type β-1,4-D-mannanases, has been crystallized using a precipitant solution consisting of 0.1 M Tris-HCl pH 8.5, 25%(w/v) polyethylene glycol 3350 by the microbatch crystallization method at 295 K. The CaMan protein crystal belonged to space group P212121, with unit-cell parameters a = 73.40, b = 83.81, c = 163.55 Å. Assuming the presence of two molecules in the asymmetric unit, the solvent content was estimated to be about 61.29%. CaMan-mannopentaose (M5) complex crystals that were isomorphous to the CaMan crystals were obtained using the same mother liquor containing 1 mM M5.

摘要

来自南极隐虾(Cryptopygus antarcticus)的CaMan基因产物属于糖苷水解酶家族5型β-1,4-D-甘露聚糖酶,已通过微批量结晶法,在295K下使用由0.1M Tris-HCl pH 8.5、25%(w/v)聚乙二醇3350组成的沉淀剂溶液进行了结晶。CaMan蛋白晶体属于空间群P212121,晶胞参数a = 73.40、b = 83.81、c = 163.55 Å。假设不对称单元中存在两个分子,溶剂含量估计约为61.29%。使用含有1 mM M5的相同母液获得了与CaMan晶体同晶型的CaMan-甘露五糖(M5)复合晶体。

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1
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2
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J Biol Chem. 2013 May 17;288(20):14624-14635. doi: 10.1074/jbc.M113.459438. Epub 2013 Apr 4.
3
Endo-β-D-1,4-mannanase from Chrysonilia sitophila displays a novel loop arrangement for substrate selectivity.嗜黄丝葚霉的内切-β-D-1,4-甘露聚糖酶展现出一种用于底物选择性的新型环排列。
Acta Crystallogr D Biol Crystallogr. 2012 Nov;68(Pt 11):1468-78. doi: 10.1107/S0907444912034646. Epub 2012 Oct 18.
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Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Oct 1;68(Pt 10):1164-8. doi: 10.1107/S1744309112037074. Epub 2012 Sep 25.
5
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Protein Expr Purif. 2012 Apr;82(2):297-301. doi: 10.1016/j.pep.2012.01.020. Epub 2012 Feb 8.
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