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新型南极跳虫内-β-1,3-葡聚糖酶的分子和生化特性研究,该酶由南极跳虫从细菌中水平获得。

Molecular and biochemical characterizations of a novel arthropod endo-beta-1,3-glucanase from the Antarctic springtail, Cryptopygus antarcticus, horizontally acquired from bacteria.

机构信息

Korea Ocean Research and Development Institute, Seoul, Republic of Korea.

出版信息

Comp Biochem Physiol B Biochem Mol Biol. 2010 Apr;155(4):403-12. doi: 10.1016/j.cbpb.2010.01.003. Epub 2010 Jan 16.

Abstract

Collembolan species have been known to have beta-1,3-glucanase activity and yet the genes coding such enzymes have not been demonstrated. We report here a novel arthropod endo-beta-1,3-glucanase gene CaLam from the Antarctic springtail, Cryptopygus antarcticus. The open reading frame consists of 813bp encoding 270 amino acids with a putative signal peptide and a typical motif of glycosyl hydrolase family 16 (GHF16), E-I-D-I-T-E. The recombinant protein expressed in E. coli shows the hydrolytic activity toward laminarin (K(m) approximately 9.98mg/mL) with an optimal temperature 50 degrees C and an optimal pH 6.0. CaLam digests laminarin and laminarioligosaccharides except laminaribiose as an endo-beta-1,3-glucanase, releasing glucose, laminaribiose and laminaritriose as the major products. Analyses of molecular phylogeny of CaLam and its protein structure reveal that CaLam is closely related with bacterial beta-1,3-glucanases more than with the eukaryotic homologues. Even so, the genomic structure of the CaLam gene consisting of six exons interspersed with approximately 57 to 63bp introns confirms that it is endogenous in the genome of the Antarctic springtail. These results suggest that CaLam should have been transferred from bacteria to the lineage of the Collembolan species by horizontal gene transfer.

摘要

跳虫物种已被证实具有β-1,3-葡聚糖酶活性,但尚未证明编码此类酶的基因的存在。我们在此报告一种来自南极跳虫 Cryptopygus antarcticus 的新型节肢动物内切-β-1,3-葡聚糖酶基因 CaLam。开放阅读框由 813bp 组成,编码 270 个氨基酸,具有推定的信号肽和糖苷水解酶家族 16(GHF16)的典型基序 E-I-D-I-T-E。在大肠杆菌中表达的重组蛋白对昆布多糖(K(m)约为 9.98mg/mL)表现出水解活性,最适温度为 50°C,最适 pH 为 6.0。CaLam 作为内切-β-1,3-葡聚糖酶,可消化昆布多糖和低聚昆布糖,除了昆布二糖,释放葡萄糖、昆布二糖和昆布三糖作为主要产物。CaLam 的分子系统发育和蛋白质结构分析表明,CaLam 与细菌β-1,3-葡聚糖酶的关系比与真核同源物的关系更为密切。即便如此,CaLam 基因的基因组结构由 6 个外显子组成,内含子约 57 至 63bp 相间排列,证实其在南极跳虫的基因组中是内源性的。这些结果表明,CaLam 可能通过水平基因转移从细菌转移到跳虫物种的谱系中。

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