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高阶染色质结构中核心组蛋白尾部结构域的核小体内部及之间的相互作用。

Intra- and inter-nucleosome interactions of the core histone tail domains in higher-order chromatin structure.

作者信息

Pepenella Sharon, Murphy Kevin J, Hayes Jeffrey J

机构信息

Department of Biochemistry and Biophysics, University of Rochester Medical Center, University of Rochester, 601 Elmwood Ave, Box 712, Rochester, NY, 14625, USA.

出版信息

Chromosoma. 2014 Mar;123(1-2):3-13. doi: 10.1007/s00412-013-0435-8. Epub 2013 Aug 31.

Abstract

Eukaryotic chromatin is a hierarchical collection of nucleoprotein structures that package DNA to form chromosomes. The initial levels of packaging include folding of long strings of nucleosomes into secondary structures and array-array association into higher-order tertiary chromatin structures. The core histone tail domains are required for the assembly of higher-order structures and mediate short- and long-range intra- and inter-nucleosome interactions with both DNA and protein targets to direct their assembly. However, important details of these interactions remain unclear and are a subject of much interest and recent investigations. Here, we review work defining the interactions of the histone N-terminal tails with DNA and protein targets relevant to chromatin higher-order structures, with a specific emphasis on the contributions of H3 and H4 tails to oligonucleosome folding and stabilization. We evaluate both classic and recent experiments determining tail structures, effect of tail cleavage/loss, and posttranslational modifications of the tails on nucleosomes and nucleosome arrays, as well as inter-nucleosomal and inter-array interactions of the H3 and H4 N-terminal tails.

摘要

真核染色质是一种核蛋白结构的分层集合,它包装DNA以形成染色体。最初的包装水平包括将长串核小体折叠成二级结构以及阵列-阵列缔合形成更高阶的三级染色质结构。核心组蛋白尾部结构域是高阶结构组装所必需的,并介导核小体内外与DNA和蛋白质靶点的短程和长程相互作用,以指导它们的组装。然而,这些相互作用的重要细节仍不清楚,是许多研究兴趣和近期研究的主题。在这里,我们综述了定义组蛋白N端尾部与与染色质高阶结构相关的DNA和蛋白质靶点相互作用的工作,特别强调了H3和H4尾部对寡核小体折叠和稳定的贡献。我们评估了经典和近期的实验,这些实验确定了尾部结构、尾部切割/缺失的影响以及尾部的翻译后修饰对核小体和核小体阵列的影响,以及H3和H4 N端尾部的核小体间和阵列间相互作用。

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