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固态 13C-、15N-MAS NMR 和分子动力学模拟探测人类大麻素型 2 受体的全局折叠。

Global fold of human cannabinoid type 2 receptor probed by solid-state 13C-, 15N-MAS NMR and molecular dynamics simulations.

机构信息

Laboratory of Membrane Biochemistry and Biophysics, NIAAA, NIH, Bethesda, Maryland, 20892.

出版信息

Proteins. 2014 Mar;82(3):452-65. doi: 10.1002/prot.24411. Epub 2013 Oct 17.

DOI:10.1002/prot.24411
PMID:23999926
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4071771/
Abstract

The global fold of human cannabinoid type 2 (CB2 ) receptor in the agonist-bound active state in lipid bilayers was investigated by solid-state (13)C- and (15)N magic-angle spinning (MAS) NMR, in combination with chemical-shift prediction from a structural model of the receptor obtained by microsecond-long molecular dynamics (MD) simulations. Uniformly (13)C- and (15)N-labeled CB2 receptor was expressed in milligram quantities by bacterial fermentation, purified, and functionally reconstituted into liposomes. (13)C MAS NMR spectra were recorded without sensitivity enhancement for direct comparison of Cα, Cβ, and C=O bands of superimposed resonances with predictions from protein structures generated by MD. The experimental NMR spectra matched the calculated spectra reasonably well indicating agreement of the global fold of the protein between experiment and simulations. In particular, the (13) C chemical shift distribution of Cα resonances was shown to be very sensitive to both the primary amino acid sequence and the secondary structure of CB2. Thus the shape of the Cα band can be used as an indicator of CB2 global fold. The prediction from MD simulations indicated that upon receptor activation a rather limited number of amino acid residues, mainly located in the extracellular Loop 2 and the second half of intracellular Loop 3, change their chemical shifts significantly (≥ 1.5 ppm for carbons and ≥ 5.0 ppm for nitrogens). Simulated two-dimensional (13) Cα(i)-(13)C=O(i) and (13)C=O(i)-(15)NH(i + 1) dipolar-interaction correlation spectra provide guidance for selective amino acid labeling and signal assignment schemes to study the molecular mechanism of activation of CB2 by solid-state MAS NMR.

摘要

在双层脂膜中,通过固态 (13)C 和 (15)N 魔角旋转 (MAS) NMR 结合来自通过微秒长的分子动力学 (MD) 模拟获得的受体结构模型的化学位移预测,研究了人类大麻素类型 2 (CB2) 受体在激动剂结合的活性状态下的全球折叠。通过细菌发酵以毫克量表达均匀 (13)C 和 (15)N 标记的 CB2 受体,进行纯化,并将其功能重建到脂质体中。记录了没有灵敏度增强的 (13)C MAS NMR 光谱,以便直接将叠加共振的 Cα、Cβ 和 C=O 带与通过 MD 生成的蛋白质结构的计算光谱进行比较。实验 NMR 光谱与计算光谱相当吻合,表明实验和模拟之间的蛋白质整体折叠一致。特别是,Cα 共振的 (13)C 化学位移分布对 CB2 的一级氨基酸序列和二级结构都非常敏感。因此,Cα 带的形状可用作 CB2 整体折叠的指标。MD 模拟的预测表明,在受体激活后,只有相当数量的氨基酸残基(主要位于细胞外环 2 和细胞内环 3 的后半部分)的化学位移发生显著变化(对于碳原子为≥1.5 ppm,对于氮原子为≥5.0 ppm)。模拟的二维 (13)Cα(i)-(13)C=O(i) 和 (13)C=O(i)-(15)NH(i + 1) 偶极相互作用相关谱为通过固态 MAS NMR 研究 CB2 激活的分子机制提供了选择性氨基酸标记和信号分配方案的指导。

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本文引用的文献

1
Structure of the human glucagon class B G-protein-coupled receptor.人胰高血糖素 B 类 G 蛋白偶联受体的结构。
Nature. 2013 Jul 25;499(7459):444-9. doi: 10.1038/nature12393. Epub 2013 Jul 17.
2
Structure of the human smoothened receptor bound to an antitumour agent.人 smoothened 受体与抗肿瘤剂结合的结构。
Nature. 2013 May 16;497(7449):338-43. doi: 10.1038/nature12167. Epub 2013 May 1.
3
Structural features for functional selectivity at serotonin receptors.血清素受体功能选择性的结构特征。
献给克劳斯·高里施的特刊。
Biophys J. 2023 Mar 21;122(6):E1-E8. doi: 10.1016/j.bpj.2023.02.022. Epub 2023 Mar 15.
4
Recombinant Expression and Purification of Cannabinoid Receptor CB, a G Protein-Coupled Receptor.大麻素受体 CB 的重组表达和纯化。一种 G 蛋白偶联受体。
Methods Mol Biol. 2021;2268:61-76. doi: 10.1007/978-1-0716-1221-7_4.
5
Thermostability of a recombinant G protein-coupled receptor expressed at high level in mammalian cell culture.在哺乳动物细胞培养中高水平表达的重组 G 蛋白偶联受体的热稳定性。
Sci Rep. 2020 Oct 8;10(1):16805. doi: 10.1038/s41598-020-73813-7.
6
Expression and Preparation of a G-Protein-Coupled Cannabinoid Receptor CB for NMR Structural Studies.用于核磁共振结构研究的G蛋白偶联大麻素受体CB的表达与制备
Curr Protoc Protein Sci. 2019 Jun;96(1):e83. doi: 10.1002/cpps.83. Epub 2019 Jan 9.
7
Molecular Dynamics Methodologies for Probing Cannabinoid Ligand/Receptor Interaction.用于探究大麻素配体/受体相互作用的分子动力学方法
Methods Enzymol. 2017;593:449-490. doi: 10.1016/bs.mie.2017.05.004. Epub 2017 Jul 4.
8
Expression and NMR Structural Studies of Isotopically Labeled Cannabinoid Receptor Type II.同位素标记的大麻素Ⅱ型受体的表达及核磁共振结构研究
Methods Enzymol. 2017;593:387-403. doi: 10.1016/bs.mie.2017.06.020. Epub 2017 Jul 11.
9
Applications of NMR to membrane proteins.核磁共振在膜蛋白研究中的应用。
Arch Biochem Biophys. 2017 Aug 15;628:92-101. doi: 10.1016/j.abb.2017.05.011. Epub 2017 May 18.
10
Membrane proteins in their native habitat as seen by solid-state NMR spectroscopy.通过固态核磁共振光谱法观察到的天然环境中的膜蛋白。
Protein Sci. 2015 Sep;24(9):1333-46. doi: 10.1002/pro.2700. Epub 2015 May 27.
Science. 2013 May 3;340(6132):615-9. doi: 10.1126/science.1232808. Epub 2013 Mar 21.
4
Structural basis for molecular recognition at serotonin receptors.血清素受体分子识别的结构基础。
Science. 2013 May 3;340(6132):610-4. doi: 10.1126/science.1232807. Epub 2013 Mar 21.
5
The dynamic process of β(2)-adrenergic receptor activation.β(2)-肾上腺素能受体激活的动态过程。
Cell. 2013 Jan 31;152(3):532-42. doi: 10.1016/j.cell.2013.01.008.
6
High-resolution crystal structure of human protease-activated receptor 1.人蛋白酶激活受体 1 的高分辨率晶体结构。
Nature. 2012 Dec 20;492(7429):387-92. doi: 10.1038/nature11701. Epub 2012 Dec 9.
7
Structure of the chemokine receptor CXCR1 in phospholipid bilayers.化学趋化因子受体 CXCR1 在磷脂双层中的结构。
Nature. 2012 Nov 29;491(7426):779-83. doi: 10.1038/nature11580. Epub 2012 Oct 21.
8
Stabilization of functional recombinant cannabinoid receptor CB(2) in detergent micelles and lipid bilayers.功能重组大麻素受体 CB(2)在去污剂胶束和脂质双层中的稳定化。
PLoS One. 2012;7(10):e46290. doi: 10.1371/journal.pone.0046290. Epub 2012 Oct 3.
9
Structure of the agonist-bound neurotensin receptor.激动剂结合神经降压素受体的结构。
Nature. 2012 Oct 25;490(7421):508-13. doi: 10.1038/nature11558. Epub 2012 Oct 10.
10
Structure of the δ-opioid receptor bound to naltrindole.δ-阿片受体与纳曲吲哚结合的结构。
Nature. 2012 May 16;485(7398):400-4. doi: 10.1038/nature11111.