Institute of Arctic and Alpine Research (INSTAAR), University of Colorado, Boulder, CO, USA.
Microbiol Mol Biol Rev. 2013 Sep;77(3):342-56. doi: 10.1128/MMBR.00051-12.
Recent research has expanded our understanding of microbial community assembly. However, the field of community ecology is inaccessible to many microbial ecologists because of inconsistent and often confusing terminology as well as unnecessarily polarizing debates. Thus, we review recent literature on microbial community assembly, using the framework of Vellend (Q. Rev. Biol. 85:183-206, 2010) in an effort to synthesize and unify these contributions. We begin by discussing patterns in microbial biogeography and then describe four basic processes (diversification, dispersal, selection, and drift) that contribute to community assembly. We also discuss different combinations of these processes and where and when they may be most important for shaping microbial communities. The spatial and temporal scales of microbial community assembly are also discussed in relation to assembly processes. Throughout this review paper, we highlight differences between microbes and macroorganisms and generate hypotheses describing how these differences may be important for community assembly. We end by discussing the implications of microbial assembly processes for ecosystem function and biodiversity.
最近的研究扩展了我们对微生物群落组装的理解。然而,由于术语不一致且常常令人困惑,以及不必要的两极化辩论,许多微生物生态学家无法接触到群落生态学领域。因此,我们使用 Vellend(Q. Rev. Biol. 85:183-206, 2010)的框架来回顾最近关于微生物群落组装的文献,以努力综合和统一这些贡献。我们首先讨论了微生物生物地理学的模式,然后描述了促成群落组装的四个基本过程(多样化、扩散、选择和漂移)。我们还讨论了这些过程的不同组合,以及它们在何处以及何时可能对塑造微生物群落最重要。还讨论了微生物群落组装的时空尺度与组装过程的关系。在整篇综述论文中,我们强调了微生物和大型生物之间的差异,并提出了描述这些差异如何可能对群落组装很重要的假设。最后,我们讨论了微生物组装过程对生态系统功能和生物多样性的影响。