Bioprocess Technology Division, National Institute for Biotechnology and Genetic Engineering , Jhang Road, Faisalabad , Pakistan.
Braz J Microbiol. 2008 Jan;39(1):143-50. doi: 10.1590/S1517-838220080001000029. Epub 2008 Mar 1.
Culturable bacterial biodiversity and industrial importance of the isolates indigenous to Khewra salt mine, Pakistan was assessed. PCR Amplification of 16S rDNA of isolates was carried out by using universal primers FD1 and rP1and products were sequenced commercially. These gene sequences were compared with other gene sequences in the GenBank databases to find the closely related sequences. The alignment of these sequences with sequences available from GenBank database was carried out to construct a phylogenetic tree for these bacteria. These genes were deposited to GenBank and accession numbers were obtained. Most of the isolates belonged to different species of genus Bacillus, sharing 92-99% 16S rDNA identity with the respective type strain. Other isolates had close similarities with Escherichia coli, Staphylococcus arlettae and Staphylococcus gallinarum with 97%, 98% and 99% 16S rDNA similarity respectively. The abilities of isolates to produce industrial enzymes (amylase, carboxymethylcellulase, xylanase, cellulase and protease) were checked. All isolates were tested against starch, carboxymethylcellulose (CMC), xylane, cellulose, and casein degradation in plate assays. BPT-5, 11,18,19 and 25 indicated the production of copious amounts of carbohydrates and protein degrading enzymes. Based on this study it can be concluded that Khewra salt mine is populated with diverse bacterial groups, which are potential source of industrial enzymes for commercial applications.
评估了巴基斯坦克瓦拉盐矿本土可培养细菌生物多样性和工业重要性。使用通用引物 FD1 和 rP1 对分离株的 16S rDNA 进行 PCR 扩增,然后商业测序。将这些基因序列与 GenBank 数据库中的其他基因序列进行比较,以找到密切相关的序列。将这些序列与来自 GenBank 数据库的序列进行比对,为这些细菌构建系统发育树。这些基因被存入 GenBank 并获得了访问号码。大多数分离株属于芽孢杆菌属的不同种,与相应的模式株具有 92-99%的 16S rDNA 同一性。其他分离株与大肠杆菌、Arlettae 葡萄球菌和鸡葡萄球菌具有密切相似性,其 16S rDNA 相似度分别为 97%、98%和 99%。检查了分离株产生工业酶(淀粉酶、羧甲基纤维素酶、木聚糖酶、纤维素酶和蛋白酶)的能力。在平板试验中,所有分离株均针对淀粉、羧甲基纤维素(CMC)、木聚糖、纤维素和酪蛋白降解进行了测试。BPT-5、11、18、19 和 25 表明产生了大量碳水化合物和蛋白降解酶。根据这项研究可以得出结论,克瓦拉盐矿中存在着多样化的细菌群体,它们是工业酶的潜在来源,可用于商业应用。