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广泛复制和转录活跃的近期来自细菌沃尔巴克氏体共生体到其宿主丝虫的侧向基因转移。

Extensively duplicated and transcriptionally active recent lateral gene transfer from a bacterial Wolbachia endosymbiont to its host filarial nematode Brugia malayi.

机构信息

Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.

出版信息

BMC Genomics. 2013 Sep 22;14:639. doi: 10.1186/1471-2164-14-639.

Abstract

BACKGROUND

Lymphatic filariasis is a neglected tropical disease afflicting more than 120 million people, while another 1.3 billion people are at risk of infection. The nematode worm Brugia malayi is one of the causative agents of the disease and exists in a mutualistic symbiosis with Wolbachia bacteria. Since extensive lateral gene transfer occurs frequently between Wolbachia and its hosts, we sought to measure the extent of such LGT in B. malayi by whole genome sequencing of Wolbachia-depleted worms.

RESULTS

A considerable fraction (at least 115.4-kbp, or 10.6%) of the 1.08-Mbp Wolbachia wBm genome has been transferred to its nematode host and retains high levels of similarity, including 227 wBm genes and gene fragments. Complete open reading frames were transferred for 32 of these genes, meaning they have the potential to produce functional proteins. Moreover, four transfers have evidence of life stage-specific regulation of transcription at levels similar to other nematode transcripts, strengthening the possibility that they are functional.

CONCLUSIONS

There is extensive and ongoing transfer of Wolbachia DNA to the worm genome and some transfers are transcribed in a stage-specific manner at biologically relevant levels.

摘要

背景

淋巴丝虫病是一种被忽视的热带病,影响着超过 1.2 亿人,另有 13 亿人面临感染风险。线虫蠕虫布鲁氏线虫是该疾病的病原体之一,与沃尔巴克氏体细菌存在互利共生关系。由于沃尔巴克氏体与其宿主之间经常发生广泛的侧向基因转移,我们试图通过对沃尔巴克氏体耗竭的蠕虫进行全基因组测序来测量布鲁氏线虫中这种 LGT 的程度。

结果

沃尔巴克氏体 wBm 基因组的相当一部分(至少 115.4-kbp,或 10.6%)已转移到其线虫宿主,并保持高度相似性,包括 227 个 wBm 基因和基因片段。其中 32 个基因的完整开放阅读框被转移,这意味着它们有可能产生功能性蛋白质。此外,有四个转移的证据表明转录受到生命阶段特异性调节,其水平与其他线虫转录物相似,这增强了它们具有功能性的可能性。

结论

沃尔巴克氏体 DNA 广泛且持续地向蠕虫基因组转移,一些转移以特定生命阶段的方式在生物学相关水平上进行转录。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/855c/3849323/ee2060617ea0/1471-2164-14-639-1.jpg

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