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海洋发光杆菌,从循环海水养殖系统中分离得到。

Photobacterium aquae sp. nov., isolated from a recirculating mariculture system.

机构信息

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.

State Key Laboratory for Biology of Plant Disease and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China.

出版信息

Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):475-480. doi: 10.1099/ijs.0.055020-0. Epub 2013 Oct 4.

Abstract

A Gram-staining-negative, heterotrophic, facultatively anaerobic bacterium, designated AE6(T), was isolated from a grouper (Epinephelus malabaricas) culture tank in a recirculating mariculture system located in Tianjin, China. Strain AE6(T) was able to grow at 15-40 °C (optimum, 30-35 °C), at pH 5.5-10.0 (optimum, pH 7.0-7.5) and in the presence of 0.5-7% (w/v) NaCl (optimum, 2-3%). It contained Q-8 as the predominant respiratory quinone, phosphatidylethanolamine (PE) and phosphatidylglycerol (PG) as the major polar lipids and C(16 : 1)ω7c/C(16 : 1)ω6c (40.4%), C(18 : 1)ω7c (15.5%) and C(16 : 0) (13.5%) as the predominant cellular fatty acids. The genomic DNA G+C content was 47.1 mol%. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain AE6(T) belonged to the genus Photobacterium (94.2-96.8% of 16S rRNA gene sequence similarity) and formed a distinct phylogenetic lineage within the genus and exhibited the highest sequence similarity to Photobacterium aphoticum CECT 7614(T) (96.8%). Multilocus sequence analysis (MLSA) using four loci (gyrB, rpoA, pyrH and recA) also revealed that strain AE6(T) was phylogenetically related to the genus Photobacterium. Based on the phylogenetic, chemotaxonomic and phenotypic evidence, strain AE6(T) is considered to represent a novel species of the genus Photobacterium, for which the name Photobacterium aquae sp. nov. is proposed. The type strain is AE6(T) ( = CGMCC 1.12159(T) = JCM 18480(T)).

摘要

一株革兰氏染色阴性、异养、兼性厌氧细菌,被命名为 AE6(T),是从中国天津一个循环海水养殖系统的石斑鱼养殖罐中分离出来的。菌株 AE6(T)能够在 15-40°C(最适温度为 30-35°C)、pH5.5-10.0(最适 pH7.0-7.5)和 0.5-7%(w/v)NaCl(最适 2-3%)的条件下生长。它含有 Q-8 作为主要的呼吸醌,磷脂酰乙醇胺(PE)和磷脂酰甘油(PG)作为主要的极性脂类,以及 C16:1ω7c/C16:1ω6c(40.4%)、C18:1ω7c(15.5%)和 C16:0(13.5%)作为主要的细胞脂肪酸。基因组 DNA G+C 含量为 47.1mol%。基于 16S rRNA 基因序列的系统发育分析表明,菌株 AE6(T)属于发光杆菌属(与 16S rRNA 基因序列相似度为 94.2-96.8%),并在该属内形成一个独特的系统发育谱系,与 Photobacterium aphoticum CECT 7614(T)(96.8%)的序列相似度最高。基于四个基因(gyrB、rpoA、pyrH 和 recA)的多位点序列分析(MLSA)也表明,菌株 AE6(T)与发光杆菌属具有系统发育关系。基于系统发育、化学分类和表型证据,菌株 AE6(T)被认为代表了发光杆菌属的一个新种,因此建议将其命名为 Photobacterium aquae sp. nov.。模式菌株为 AE6(T)( = CGMCC 1.12159(T) = JCM 18480(T))。

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