Department of Biology, Brigham Young University, 401 WIDB, Provo, UT 84602, USA.
BMC Evol Biol. 2013 Oct 9;13:223. doi: 10.1186/1471-2148-13-223.
Climatic and sea-level fluctuations throughout the last Pleistocene glacial cycle (~130-0 ka) profoundly influenced present-day distributions and genetic diversity of Northern Hemisphere biotas by forcing range contractions in many species during the glacial advance and allowing expansion following glacial retreat ('expansion-contraction' model). Evidence for such range dynamics and refugia in the unglaciated Gulf-Atlantic Coastal Plain stems largely from terrestrial species, and aquatic species Pleistocene responses remain relatively uninvestigated. Heterandria formosa, a wide-ranging regional endemic, presents an ideal system to test the expansion-contraction model within this biota. By integrating ecological niche modeling and phylogeography, we infer the Pleistocene history of this livebearing fish (Poeciliidae) and test for several predicted distributional and genetic effects of the last glaciation.
Paleoclimatic models predicted range contraction to a single southwest Florida peninsula refugium during the Last Glacial Maximum, followed by northward expansion. We inferred spatial-population subdivision into four groups that reflect genetic barriers outside this refuge. Several other features of the genetic data were consistent with predictions derived from an expansion-contraction model: limited intraspecific divergence (e.g. mean mtDNA p-distance = 0.66%); a pattern of mtDNA diversity (mean Hd = 0.934; mean π = 0.007) consistent with rapid, recent population expansion; a lack of mtDNA isolation-by-distance; and clinal variation in allozyme diversity with higher diversity at lower latitudes near the predicted refugium. Statistical tests of mismatch distributions and coalescent simulations of the gene tree lent greater support to a scenario of post-glacial expansion and diversification from a single refugium than to any other model examined (e.g. multiple-refugia scenarios).
Congruent results from diverse data indicate H. formosa fits the classic Pleistocene expansion-contraction model, even as the genetic data suggest additional ecological influences on population structure. While evidence for Plio-Pleistocene Gulf Coast vicariance is well described for many freshwater species presently codistributed with H. formosa, this species demography and diversification departs notably from this pattern. Species-specific expansion-contraction dynamics may therefore have figured more prominently in shaping Coastal Plain evolutionary history than previously thought. Our findings bolster growing appreciation for the complexity of phylogeographical structuring within North America's southern refugia, including responses of Coastal Plain freshwater biota to Pleistocene climatic fluctuations.
在上一个更新世冰川周期(约 130-0 万年)中,气候和海平面波动极大地影响了北半球生物群的现今分布和遗传多样性,因为在冰川前进期间迫使许多物种的范围收缩,而在冰川后退时则允许其扩张(“扩张-收缩”模型)。在无冰的墨西哥湾-大西洋沿海平原,这种范围动态和避难所的证据主要来自陆地物种,而水生物种的更新世反应仍然相对没有得到充分研究。广泛分布的区域性特有种 Heterandria formosa 是一个理想的系统,可以在该生物群中检验扩张-收缩模型。通过整合生态位建模和系统地理学,我们推断了这种卵胎生鱼类(胎生鱂科)的更新世历史,并检验了最后一次冰河作用的几个预测分布和遗传效应。
古气候模型预测,在上一个末次冰期最大期,范围收缩到一个单一的佛罗里达州西南部半岛避难所,随后向北扩张。我们推断出四个群体的空间-种群划分,反映了该避难所以外的遗传障碍。遗传数据的其他几个特征与扩张-收缩模型得出的预测一致:种内分歧有限(例如,线粒体 DNA p 距离的平均值=0.66%);与快速、近期种群扩张一致的线粒体 DNA 多样性模式(平均 Hd=0.934;平均π=0.007);缺乏线粒体 DNA 隔离距离;以及同工酶多样性的渐变变异,在预测的避难所附近的较低纬度地区多样性较高。不连续分布拟合度检验和基因树的合并模拟对后冰期扩张和单一避难所多样化的情景提供了更大的支持,而不是对任何其他检查的模型(例如,多个避难所情景)。
来自不同数据的一致结果表明,H. formosa 符合经典的更新世扩张-收缩模型,即使遗传数据表明种群结构还受到其他生态因素的影响。虽然许多与 H. formosa 现今共分布的淡水物种的上新世-更新世墨西哥湾海岸间断的证据已经很好地描述,但该物种的种群动态和多样化明显偏离了这种模式。因此,物种特异性的扩张-收缩动态可能比以前认为的更能突出地影响沿海平原的进化历史。我们的研究结果增强了人们对北美南部避难所内系统地理学复杂性的认识,包括沿海平原淡水生物群对更新世气候波动的反应。