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通过基因组学破解不寻常的未培养磁生多细胞原核生物。

Deciphering unusual uncultured magnetotactic multicellular prokaryotes through genomics.

机构信息

Instituto de Microbiologia Paulo de Góes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.

1] Departamento de Matemática Aplicada e Computacional, Laboratório Nacional de Computação Científica, Petrópolis, Brazil [2] Embrapa Suínos e Aves, Santa Catarina, Brazil.

出版信息

ISME J. 2014 May;8(5):1055-68. doi: 10.1038/ismej.2013.203. Epub 2013 Nov 7.

Abstract

Candidatus Magnetoglobus multicellularis (Ca. M. multicellularis) is a member of a group of uncultured magnetotactic prokaryotes that possesses a unique multicellular morphology. To better understand this organism's physiology, we used a genomic approach through pyrosequencing. Genomic data analysis corroborates previous structural studies and reveals the proteins that are likely involved in multicellular morphogenesis of this microorganism. Interestingly, some detected protein sequences that might be involved in cell adhesion are homologues to phylogenetically unrelated filamentous multicellular bacteria proteins, suggesting their contribution in the early development of multicellular organization in Bacteria. Genes related to the behavior of Ca. M. multicellularis (chemo-, photo- and magnetotaxis) and its metabolic capabilities were analyzed. On the basis of the genomic-physiologic information, enrichment media were tested. One medium supported chemoorganoheterotrophic growth of Ca. M. multicellularis and allowed the microorganisms to maintain their multicellular morphology and cell cycle, confirming for the first time that the entire life cycle of the MMP occurs in a multicellular form. Because Ca. M. multicellularis has a unique multicellular life style, its cultivation is an important achievement for further studies regarding the multicellular evolution in prokaryotes.

摘要

多细胞磁小体菌(Ca. M. multicellularis)是一组未培养的趋磁原核生物中的一员,具有独特的多细胞形态。为了更好地了解该生物体的生理学特性,我们采用焦磷酸测序的基因组方法进行研究。基因组数据分析证实了先前的结构研究,并揭示了可能参与该微生物多细胞形态发生的蛋白质。有趣的是,一些检测到的可能参与细胞黏附的蛋白质序列与系统发育上不相关的丝状多细胞细菌蛋白同源,这表明它们可能在细菌多细胞组织的早期发育中发挥作用。分析了与 Ca. M. multicellularis 的行为(趋化性、趋光性和趋磁性)及其代谢能力相关的基因。基于基因组-生理学信息,我们测试了富集培养基。一种培养基支持 Ca. M. multicellularis 的化能有机异养生长,并允许微生物保持其多细胞形态和细胞周期,这首次证实 MMP 的整个生命周期都是以多细胞形式存在的。由于 Ca. M. multicellularis 具有独特的多细胞生活方式,因此其培养是进一步研究原核生物多细胞进化的重要成就。

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