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嗜冷亚硝化螺菌属菌株APG3的基因组序列草图，该菌株是从桑迪湖沉积物中分离出的一株耐冷氨氧化细菌。

Draft Genome Sequence of Nitrosospira sp. Strain APG3, a Psychrotolerant Ammonia-Oxidizing Bacterium Isolated from Sandy Lake Sediment.

作者信息

Garcia Juan C, Urakawa Hidetoshi, Le Vang Q, Stein Lisa Y, Klotz Martin G, Nielsen Jeppe L

机构信息

Department of Marine and Ecological Sciences, Florida Gulf Coast University, Fort Myers, Florida, USA.

出版信息

Genome Announc. 2013 Nov 7;1(6):e00930-13. doi: 10.1128/genomeA.00930-13.

DOI:10.1128/genomeA.00930-13
PMID:24201205
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3820786/
Abstract

Bacteria in the genus Nitrosospira play vital roles in the nitrogen cycle. Nitrosospira sp. strain APG3 is a psychrotolerant betaproteobacterial ammonia-oxidizing bacterium isolated from freshwater lake sediment. The draft genome revealed that it represents a new species of cluster 0 Nitrosospira, which is presently not represented by described species.

摘要

亚硝化螺菌属细菌在氮循环中起着至关重要的作用。亚硝化螺菌菌株APG3是一种从淡水湖沉积物中分离出来的耐冷β-变形氨氧化细菌。基因组草图显示，它代表了亚硝化螺菌0簇的一个新物种，目前尚未有已描述的物种与之对应。

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Front Microbiol. 2013 Sep 13;4:277. doi: 10.3389/fmicb.2013.00277. eCollection 2013.
2
Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil.从硝化酸性土壤中培养专性嗜酸氨氧化菌。
Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15892-7. doi: 10.1073/pnas.1107196108. Epub 2011 Sep 6.
3
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Appl Environ Microbiol. 2008 Jun;74(11):3559-72. doi: 10.1128/AEM.02722-07. Epub 2008 Apr 4.
4
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities.DNA-DNA杂交值及其与全基因组序列相似性的关系。
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The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes.基因组注释的子系统方法及其在千人基因组注释计划中的应用。
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