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基于家系的外显子组测序方法鉴定出锂反应性双相情感障碍的罕见易感变异。

Family-based exome-sequencing approach identifies rare susceptibility variants for lithium-responsive bipolar disorder.

机构信息

a Department of Human Genetics, McGill University, Montréal, QC, Canada.

出版信息

Genome. 2013 Oct;56(10):634-40. doi: 10.1139/gen-2013-0081. Epub 2013 Sep 17.

Abstract

Bipolar disorder (BD) is a psychiatric condition characterized by the occurrence of at least two episodes of clinically disturbed mood including mania and depression. A vast literature describing BD studies suggests that a strong genetic contribution likely underlies this condition; heritability is estimated to be as high as 80%. Many studies have identified BD susceptibility loci, but because of the genetic and phenotypic heterogeneity observed across individuals, very few loci were subsequently replicated. Research in BD genetics to date has consisted of classical linkage or genome-wide association studies, which have identified candidate genes hypothesized to present common susceptibility variants. Although the observation of such common variants is informative, they can only explain a small fraction of the predicted BD heritability, suggesting a considerable contribution would come from rare and highly penetrant variants. We are seeking to identify such rare variants, and to increase the likelihood of being successful, we aimed to reduce the phenotypic heterogeneity factor by focusing on a well-defined subphenotype of BD: excellent response to lithium monotherapy. Our group has previously shown positive response to lithium therapy clusters in families and has a consistent clinical presentation with minimal comorbidity. To identify such rare variants, we are using a targeted exome capture and high-throughput DNA sequencing approach, and analyzing the entire coding sequences of BD affected individuals from multigenerational families. We are prioritizing rare variants with a frequency of less than 1% in the population that segregate with affected status within each family, as well as being potentially highly penetrant (e.g., protein truncating, missense, or frameshift) or functionally relevant (e.g., 3'UTR, 5'UTR, or splicing). By focusing on rare variants in a familial cohort, we hope to explain a significant portion of the missing heritability in BD, as well as to narrow our current insight on the key biochemical pathways implicated in this complex disorder.

摘要

双相情感障碍(BD)是一种精神疾病,其特征是至少出现两次临床紊乱的情绪发作,包括躁狂和抑郁。大量描述 BD 研究的文献表明,这种情况很可能有很强的遗传因素;遗传率估计高达 80%。许多研究已经确定了 BD 的易感基因座,但由于个体之间存在遗传和表型异质性,很少有基因座随后得到复制。迄今为止,BD 遗传学研究包括经典连锁或全基因组关联研究,这些研究确定了假设存在常见易感变异的候选基因。尽管观察到这种常见变异很有意义,但它们只能解释 BD 可预测遗传率的一小部分,这表明很大一部分遗传率来自罕见且高度外显的变异。我们正在寻找这种罕见的变异,为了增加成功的可能性,我们旨在通过关注 BD 的一个明确的亚表型:对锂单药治疗的极好反应,来降低表型异质性因素。我们的小组之前已经在家庭中显示出对锂治疗反应的阳性聚类,并且具有一致的临床表现,最小的合并症。为了识别这种罕见的变异,我们使用了靶向外显子捕获和高通量 DNA 测序方法,并分析了来自多代家族的 BD 受影响个体的整个编码序列。我们优先考虑在人群中频率低于 1%的罕见变异,这些变异在每个家庭内与受影响的状态分离,并且具有潜在的高度外显率(例如,蛋白质截断、错义或移码)或功能相关性(例如,3'UTR、5'UTR 或剪接)。通过关注家族队列中的罕见变异,我们希望能解释 BD 中大量缺失的遗传率,并缩小我们目前对涉及这种复杂疾病的关键生化途径的认识。

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