Sjöhamn Jennie, Hedfalk Kristina
Department of Chemistry and Molecular Biology, University of Gothenburg, P.O. Box 462, SE-405 30 Göteborg, Sweden.
Department of Chemistry and Molecular Biology, University of Gothenburg, P.O. Box 462, SE-405 30 Göteborg, Sweden.
Biochim Biophys Acta. 2014 May;1840(5):1614-23. doi: 10.1016/j.bbagen.2013.11.012. Epub 2013 Nov 16.
Insight into protein-protein interactions (PPIs) is highly desirable in order to understand the physiology of cellular events. This understanding is one of the challenges in biochemistry and molecular biology today, especially for eukaryotic membrane proteins where hurdles of production, purification and structural determination must be passed.
We have explored the common strategies used to find medically relevant interaction partners of aquaporins (AQPs). The most frequently used methods to detect direct contact, yeast two-hybrid interaction assay and co-precipitation, are described together with interactions specifically found for the selected targets AQP0, AQP2, AQP4 and AQP5.
The vast majority of interactions involve the aquaporin C-terminus and the characteristics of the interaction partners are strikingly diverse. While the well-established methods for PPIs are robust, a novel approach like bimolecular fluorescence complementation (BiFC) is attractive for screening many conditions as well as transient interactions. The ultimate goal is structural evaluation of protein complexes in order to get mechanistic insight into how proteins communicate at a molecular level.
What we learn from the human aquaporin field in terms of method development and communication between proteins can be of major use for any integral membrane protein of eukaryotic origin. This article is part of a Special Issue entitled Aquaporins.
为了解细胞事件的生理学,深入了解蛋白质-蛋白质相互作用(PPI)非常必要。这种理解是当今生物化学和分子生物学面临的挑战之一,尤其是对于真核膜蛋白而言,必须克服生产、纯化和结构测定等障碍。
我们探讨了用于寻找水通道蛋白(AQP)医学相关相互作用伙伴的常见策略。描述了检测直接接触最常用的方法,即酵母双杂交相互作用测定和共沉淀法,以及针对选定靶点AQP0、AQP2、AQP4和AQP5专门发现的相互作用。
绝大多数相互作用涉及水通道蛋白的C末端,且相互作用伙伴的特征差异显著。虽然成熟的PPI方法很可靠,但像双分子荧光互补(BiFC)这样的新方法对于筛选多种条件以及瞬时相互作用很有吸引力。最终目标是对蛋白质复合物进行结构评估,以便在分子水平上深入了解蛋白质如何相互通讯。
我们从人类水通道蛋白领域在方法开发和蛋白质间通讯方面学到的知识,对于任何真核来源的整合膜蛋白都可能有很大用处。本文是名为“水通道蛋白”的特刊的一部分。