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O、S、Se、F、Cl、Br 和 I 的范德华原子半径各向异性。

On the anisotropy of van der Waals atomic radii of O, S, Se, F, Cl, Br, and I.

机构信息

Department of Chemistry, Georgetown University , Washington, D.C. 20057-1227, United States.

出版信息

J Phys Chem A. 2013 Dec 27;117(51):14184-90. doi: 10.1021/jp4077728. Epub 2013 Dec 11.

Abstract

The Cambridge Structural Database (CSD) was used to obtain flattening factors to describe the overall anisotropy of nonbonding van der Waals (vdW) contacts between several main group elements. The method for obtaining the flattening factors is based on a novel minimization process. Results show that the vdW contact distances are significantly dependent on the environment and the orientations of the surrounding covalently bonded atoms: head-on vdW contacts are generally shorter than sideways contacts in overall agreement with earlier results by Nyburg and Faerman (Acta Crystallogr., Sect. B: Struct. Sci. 1985, 41, 274-279). With the exception of Se, we find flattening factors that are somewhat smaller than those found earlier. High-level ab initio quantum chemical calculations using Ar and Ne as a probe also confirm the flattening effect and its dependency on the environment. A dozen popular long-range corrected and dispersion supplemented density functionals are compared with the CCSD(T) data. While several of them perform quite poorly, four DFT-D methods, especially B3LYP-GD3BJ, provided vdW flattening similar to those found by the CCSD(T) theory and experiment.

摘要

剑桥结构数据库(CSD)被用来获得展平因子,以描述几个主族元素之间的非键范德华(vdW)接触的整体各向异性。获得展平因子的方法基于一种新颖的最小化过程。结果表明,vdW 接触距离显著依赖于环境和周围共价键合原子的取向:迎面 vdW 接触通常比侧向接触短,这与 Nyburg 和 Faerman(晶体学学报,B 部分:结构科学,1985,41,274-279)的早期结果一致。除 Se 外,我们发现的展平因子略小于早期发现的。使用 Ar 和 Ne 作为探针的高级从头算量子化学计算也证实了展平效应及其对环境的依赖性。十几个流行的长程修正和色散补充密度泛函与 CCSD(T)数据进行了比较。尽管其中有几个表现相当差,但四种 DFT-D 方法,特别是 B3LYP-GD3BJ,提供了与 CCSD(T)理论和实验结果相似的 vdW 展平。

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