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抗锑利什曼原虫突变株的蛋白质组学和基因组学分析。

Proteomic and genomic analyses of antimony resistant Leishmania infantum mutant.

机构信息

Centre de Recherche en Infectiologie du Centre de Recherche du CHU de Québec, Pavillon CHUL, and Département de Microbiologie-Infectiologie et Immunologie, Faculté de Médecine, Université Laval, Québec, Canada.

出版信息

PLoS One. 2013 Nov 27;8(11):e81899. doi: 10.1371/journal.pone.0081899. eCollection 2013.

Abstract

BACKGROUND

Antimonials remain the primary antileishmanial drugs in most developing countries. However, drug resistance to these compounds is increasing and our understanding of resistance mechanisms is partial.

METHODS/PRINCIPAL FINDINGS: In the present study, quantitative proteomics using stable isotope labelling of amino acids in cell culture (SILAC) and genome next generation sequencing were used in order to better characterize in vitro generated Leishmania infantum antimony resistant mutant (Sb2000.1). Using the proteomic method, 58 proteins were found to be differentially regulated in Sb2000.1. The ABC transporter MRPA (ABCC3), a known marker of antimony resistance, was observed for the first time in a proteomic screen. Furthermore, transfection of its gene conferred antimony resistance in wild-type cells. Next generation sequencing revealed aneuploidy for 8 chromosomes in Sb2000.1. Moreover, specific amplified regions derived from chromosomes 17 and 23 were observed in Sb2000.1 and a single nucleotide polymorphism (SNP) was detected in a protein kinase (LinJ.33.1810-E629K).

CONCLUSION/SIGNIFICANCE: Our results suggest that differentially expressed proteins, chromosome number variations (CNVs), specific gene amplification and SNPs are important features of antimony resistance in Leishmania.

摘要

背景

在大多数发展中国家,锑剂仍然是治疗利什曼病的主要药物。然而,这些化合物的耐药性正在增加,我们对耐药机制的理解也不完整。

方法/主要发现:在本研究中,使用稳定同位素标记的细胞培养氨基酸(SILAC)和基因组下一代测序的定量蛋白质组学方法,以更好地描述体外产生的利什曼原虫抗锑突变体(Sb2000.1)。通过蛋白质组学方法,发现 Sb2000.1 中有 58 种蛋白质表达差异。ABC 转运蛋白 MRPA(ABCC3)是一种已知的锑耐药标志物,首次在蛋白质组学筛选中观察到。此外,其基因的转染可使野生型细胞产生抗锑性。下一代测序显示 Sb2000.1 存在 8 条染色体的非整倍性。此外,在 Sb2000.1 中观察到来自染色体 17 和 23 的特定扩增区域,并且在一个蛋白激酶(LinJ.33.1810-E629K)中检测到单核苷酸多态性(SNP)。

结论/意义:我们的结果表明,差异表达蛋白、染色体数量变异(CNVs)、特定基因扩增和 SNPs 是利什曼原虫抗锑性的重要特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b569/3842243/116f2dd633b5/pone.0081899.g001.jpg

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