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在何种条件下,鸟嘌呤-胞嘧啶(G.C)沃森-克里克DNA碱基对会获得腺嘌呤-胸腺嘧啶(A.T)沃森-克里克DNA碱基对所特有的全部四种构型?

[Under what conditions does G.C Watson-Crick DNA base pair acquire all four configurations characteristic for A.T Watson-Crick DNA base pair?].

作者信息

Brovarets' O O

出版信息

Ukr Biokhim Zh (1999). 2013 Jul-Aug;85(4):98-103. doi: 10.15407/ubj85.04.098.

Abstract

At the MP2/6-311++G(2df,pd)//B3LYP/6-311++G(d,p) level of theory it was established for the first time, that the Löwdin's G*.C* DNA base pair formed by the mutagenic tautomers can acquire, as the A-T Watson-Crick DNA base pair, four biologically important configurations, namely: Watson-Crick, reverse Watson-Crick, Hoogsteen and reverse Hoogsteen. This fact demonstrates rather unexpected role of the tautomerisation of the one of the Watson-Crick DNA base pairs, in particular, via double proton transfer: exactly the G.C-->G*.C* tautomerisation allows to overcome steric hindrances for the implementation of the above mentioned configurations. Geometric, electron-topological and energetic properties of the H-bonds that stabilise the studied pairs, as well as the energetic characteristics of the latters are presented.

摘要

在MP2/6-311++G(2df,pd)//B3LYP/6-311++G(d,p)理论水平上,首次确定由诱变互变异构体形成的洛丁的G*.C* DNA碱基对可以像A-T沃森-克里克DNA碱基对一样获得四种生物学上重要的构型,即:沃森-克里克、反向沃森-克里克、霍格施泰因和反向霍格施泰因。这一事实表明,沃森-克里克DNA碱基对之一的互变异构,特别是通过双质子转移,具有相当意想不到的作用:正是G.C→G*.C*互变异构使得上述构型的实现能够克服空间位阻。文中给出了稳定所研究碱基对的氢键的几何、电子拓扑和能量性质,以及后者的能量特征。

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