Singh Santosh K, Kumar Sumit, Das Aloke
Department of Chemistry, Indian Institute of Science Education and Research (IISER), Dr Homi Bhabha Road, Pune-411008, Maharashtra, India.
Phys Chem Chem Phys. 2014 May 21;16(19):8819-27. doi: 10.1039/c3cp54169j.
In this work, we have investigated a subtle competition between a very weak n → π(Ar)* interaction and a very strong hydrogen bond (N-H···N) interaction present in the complexes of 7-azaindole with a series of 2,6-substituted fluoropyridines and observed how the weak interaction modulates the overall structural motif of these complexes in the presence of the strong interaction. We have studied the structures and binding energies of these complexes using MP2 as well as dispersion-corrected DFT calculations. It has been found that the strength of the N-H···N interaction in these complexes decreases with increasing fluorination in the fluoropyridine ring while the proximity between the nitrogen atom in 7-azaindole and the aromatic ring of fluoropyridine increases through n → π(Ar)* interaction. Comparison of the binding energy values as well as structural parameters of these complexes calculated at the B3LYP level with those obtained at the MP2, M05-2X, and B97-D levels of theory clearly indicates that the dispersion effect is mostly responsible for this attractive n → π(Ar)* interaction. This conclusion is also supported by localized molecular orbital-energy decomposition analysis (LMO-EDA). The current investigation is the first theoretical study on the n → π(Ar)* interaction in the presence of a conventional strong hydrogen bonding interaction in the molecular system. Thus the present study has great significance for understanding the structures of the biomolecules as well as materials, as these interactions are very often present there simultaneously.
在本研究中,我们考察了7-氮杂吲哚与一系列2,6-二取代氟吡啶形成的配合物中,非常弱的n→π(Ar)*相互作用与非常强的氢键(N-H···N)相互作用之间的微妙竞争,并观察了在强相互作用存在的情况下,弱相互作用如何调节这些配合物的整体结构模式。我们使用MP2以及色散校正的DFT计算研究了这些配合物的结构和结合能。研究发现,这些配合物中N-H···N相互作用的强度随着氟吡啶环中氟化程度的增加而降低,而7-氮杂吲哚中的氮原子与氟吡啶的芳环之间通过n→π(Ar)*相互作用的距离增加。将在B3LYP水平计算得到的这些配合物的结合能值和结构参数与在MP2、M05-2X和B97-D理论水平得到的结果进行比较,清楚地表明色散效应是这种有吸引力的n→π(Ar)*相互作用的主要原因。这一结论也得到了定域分子轨道-能量分解分析(LMO-EDA)的支持。当前的研究是关于分子体系中在传统强氢键相互作用存在下n→π(Ar)*相互作用的首次理论研究。因此,本研究对于理解生物分子以及材料的结构具有重要意义,因为这些相互作用在其中常常同时存在。