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一种用于检测铜绿假单胞菌的新型多重 PCR:一种主要的伤口感染病原体。

A novel multiplex PCR for detection of Pseudomonas aeruginosa: A major cause of wound infections.

机构信息

Muhammad Salman BS, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad affiliated with Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan.

Dr. Aamir Ali, PhD, Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad affiliated with Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan.

出版信息

Pak J Med Sci. 2013 Jul;29(4):957-61. doi: 10.12669/pjms.294.3652.

Abstract

BACKGROUND AND OBJECTIVE

Wound infections are often difficult to treat due to various bacterial pathogens. Pseudomonas aeruginosa is one of the common invaders of open wounds. Precise diagnosis of this etiological agent in wound infections is of critical importance particularly in treatment of problematic cases. The existing diagnostic methods have certain limitations particularly related to specificity. Our objective was to to establish a comprehensive and reliable multiplex PCR to confirm diagnosis of P. aeruginosa.

METHODS

A multiplex PCR test was developed for rapid and comprehensive identification of P. aeruginosa. Four highly specific genes were targeted simultaneously for detection of genus, species and exotoxin production (16S rDNA, gyrB, oprL and ETA) in P. aeruginosa; additionally one internal control gene (invA) of Salmonella was used. The specificity of the multiplex PCR was confirmed using internal and negative controls. Amplified fragments were confirmed by restriction analysis and DNA sequencing.

RESULTS

The developed method was applied on 40 morphologically suspected P. aeruginosa isolates (from 200 pus samples) and 18 isolates were confirmed as P. aeruginosa. In comparison, only 12 could be identified biochemically.

CONCLUSIONS

Combination of the four reported genes in multiplex PCR provided more confident and comprehensive detection of P. aeruginosa which is applicable for screening of wound infections and assisting treatment strategy.

摘要

背景与目的

由于各种细菌病原体的存在,伤口感染往往难以治疗。铜绿假单胞菌是常见的开放性伤口入侵病原体之一。在治疗有问题的病例时,准确诊断这种病原体对于伤口感染的治疗至关重要。现有的诊断方法存在一定的局限性,尤其是特异性方面。我们的目标是建立一种全面可靠的多重 PCR 方法,以确认铜绿假单胞菌的诊断。

方法

开发了一种快速全面鉴定铜绿假单胞菌的多重 PCR 检测方法。同时针对属、种和外毒素产生(16S rDNA、gyrB、oprL 和 ETA)靶向四个高度特异性基因;此外还使用了沙门氏菌的一个内部对照基因(invA)。通过内部和阴性对照确认多重 PCR 的特异性。通过限制性分析和 DNA 测序确认扩增片段。

结果

该方法应用于 40 个形态学疑似铜绿假单胞菌的分离株(来自 200 个脓液样本),其中 18 个被确认为铜绿假单胞菌。相比之下,仅通过生化方法鉴定了 12 个。

结论

多重 PCR 中报告的四个基因的组合提供了更可信和全面的铜绿假单胞菌检测,适用于伤口感染的筛选,并辅助治疗策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f37b/3817763/03bdea7233f6/pjms-29-957-g001.jpg

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