School of Biosciences, University of Kent, Canterbury, United Kingdom; Astbury Centre for Structural Molecular Biology, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom.
Astbury Centre for Structural Molecular Biology, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom.
Biophys J. 2013 Dec 17;105(12):2811-9. doi: 10.1016/j.bpj.2013.10.034.
Delineating the nanoscale properties and the dynamic assembly and disassembly behaviors of amyloid fibrils is key for technological applications that use the material properties of amyloid fibrils, as well as for developing treatments of amyloid-associated disease. However, quantitative mechanistic understanding of the complex processes involving these heterogeneous supramolecular systems presents challenges that have yet to be resolved. Here, we develop an approach that is capable of resolving the time dependence of fibril particle concentration, length distribution, and length and position dependence of fibril fragmentation rates using a generic mathematical framework combined with experimental data derived from atomic force microscopy analysis of fibril length distributions. By application to amyloid assembly of β2-microglobulin in vitro under constant mechanical stirring, we present a full description of the fibril fragmentation and growth behavior, and demonstrate the predictive power of the approach in terms of the samples' fibril dimensions, fibril load, and their efficiency to seed the growth of new amyloid fibrils. The approach developed offers opportunities to determine, quantify, and predict the course and the consequences of amyloid assembly.
阐明淀粉样纤维的纳米级特性以及其动态组装和拆卸行为对于利用淀粉样纤维的材料特性的技术应用以及开发与淀粉样蛋白相关疾病的治疗方法至关重要。然而,对于涉及这些异质超分子系统的复杂过程,定量的机械理解仍然存在尚未解决的挑战。在这里,我们开发了一种方法,该方法能够使用通用的数学框架结合原子力显微镜分析纤维长度分布得出的实验数据来解析纤维颗粒浓度,长度分布以及纤维碎片化速率的长度和位置依赖性的时间依赖性。通过在恒定机械搅拌下对β2-微球蛋白的体外淀粉样组装进行应用,我们全面描述了纤维的碎片化和生长行为,并展示了该方法在样品纤维尺寸,纤维负载及其诱导新的淀粉样纤维生长的效率方面的预测能力。所开发的方法为确定,量化和预测淀粉样蛋白组装的过程和结果提供了机会。