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GATA因子在成年小鼠肝脏中的功能。

Function of GATA factors in the adult mouse liver.

作者信息

Zheng Rena, Rebolledo-Jaramillo Boris, Zong Yiwei, Wang Liqing, Russo Pierre, Hancock Wayne, Stanger Ben Z, Hardison Ross C, Blobel Gerd A

机构信息

Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America ; Division of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.

Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania, United States of America.

出版信息

PLoS One. 2013 Dec 18;8(12):e83723. doi: 10.1371/journal.pone.0083723. eCollection 2013.

Abstract

GATA transcription factors and their Friend of Gata (FOG) cofactors control the development of diverse tissues. GATA4 and GATA6 are essential for the expansion of the embryonic liver bud, but their expression patterns and functions in the adult liver are unclear. We characterized the expression of GATA and FOG factors in whole mouse liver and purified hepatocytes. GATA4, GATA6, and FOG1 are the most prominently expressed family members in whole liver and hepatocytes. GATA4 chromatin immunoprecipitation followed by high throughput sequencing (ChIP-seq) identified 4409 occupied sites, associated with genes enriched in ontologies related to liver function, including lipid and glucose metabolism. However, hepatocyte-specific excision of Gata4 had little impact on gross liver architecture and function, even under conditions of regenerative stress, and, despite the large number of GATA4 occupied genes, resulted in relatively few changes in gene expression. To address possible redundancy between GATA4 and GATA6, both factors were conditionally excised. Surprisingly, combined Gata4,6 loss did not exacerbate the phenotype resulting from Gata4 loss alone. This points to the presence of an unusually robust transcriptional network in adult hepatocytes that ensures the maintenance of liver function.

摘要

GATA转录因子及其Gata之友(FOG)辅因子控制着多种组织的发育。GATA4和GATA6对胚胎肝芽的扩展至关重要,但它们在成年肝脏中的表达模式和功能尚不清楚。我们对全小鼠肝脏和纯化的肝细胞中GATA和FOG因子的表达进行了表征。GATA4、GATA6和FOG1是全肝和肝细胞中表达最显著的家族成员。GATA4染色质免疫沉淀结合高通量测序(ChIP-seq)确定了4409个占据位点,这些位点与富集于肝功能相关本体的基因相关,包括脂质和葡萄糖代谢。然而,即使在再生应激条件下,肝细胞特异性切除Gata4对肝脏大体结构和功能几乎没有影响,并且,尽管有大量GATA4占据的基因,但基因表达的变化相对较少。为了探究GATA4和GATA6之间可能存在的冗余性,我们对这两个因子进行了条件性切除。令人惊讶的是,Gata4和Gata6联合缺失并没有加剧仅Gata4缺失所导致的表型。这表明成年肝细胞中存在一个异常强大的转录网络,可确保肝功能的维持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8594/3867416/561f3828be95/pone.0083723.g001.jpg

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