UMR 7618 Bioemco-Ibios, Université Paris-Est Créteil, 61 avenue du Général de Gaulle, 94010, Créteil Cedex, France.
Mol Ecol. 2014 Feb;23(4):902-20. doi: 10.1111/mec.12641.
Species delimitation and identification can be arduous for taxa whose morphologic characters are easily confused, which can hamper global biodiversity assessments and pest species management. Exploratory methods of species delimitation that use DNA sequence as their primary information source to establish group membership and estimate putative species boundaries are useful approaches, complementary to traditional taxonomy. Termites of the genus Nasutitermes make interesting models for the application of such methods. They are dominant in Neotropical primary forests but also represent major agricultural and structural pests. Despite the prevalence, pivotal ecological role and economical impact of this group, the taxonomy of Nasutitermes species mainly depends on unreliable characters of soldier external morphology. Here, we generated robust species hypotheses for 79 Nasutitermes colonies sampled throughout French Guiana without any a priori knowledge of species affiliation. Sequence analysis of the mitochondrial cytochrome oxidase II gene was coupled with exploratory species-delimitation tools, using the automatic barcode gap discovery method (ABGD) and a generalized mixed Yule-coalescent model (GMYC) to propose primary species hypotheses (PSHs). PSHs were revaluated using phylogenetic analyses of two more loci (mitochondrial 16S rDNA and nuclear internal transcribed spacer 2) leading to 16 retained secondary species hypotheses (RSSH). Seven RSSHs, represented by 44/79 of the sampled colonies, were morphologically affiliated to species recognized as pests in the Neotropics, where they represent a real invasive pest potential in the context of growing ecosystem anthropization. Multigenic phylogenies based on combined alignments (1426-1784 bp) were also reconstructed to identify ancestral ecological niches and major-pest lineages, revealing that Guyanese pest species do not form monophyletic groups.
物种的划分和鉴定对于那些形态特征容易混淆的类群来说可能很困难,这可能会阻碍全球生物多样性评估和害虫物种管理。使用 DNA 序列作为主要信息源来确定群体归属并估计假定物种边界的探索性物种划分方法是一种有用的方法,与传统分类学相辅相成。鼻白蚁属的白蚁是应用此类方法的有趣模型。它们在新热带原生林占主导地位,但也是主要的农业和结构害虫。尽管该群体普遍存在、具有关键的生态作用和经济影响,但鼻白蚁属物种的分类主要依赖于兵蚁外部形态的不可靠特征。在这里,我们在没有任何物种归属先验知识的情况下,对从法属圭亚那各地采集的 79 个鼻白蚁属群体进行了稳健的物种假设生成。线粒体细胞色素氧化酶 II 基因的序列分析与探索性物种划分工具相结合,使用自动条码间隙发现方法(ABGD)和广义混合 Yule 合并模型(GMYC)来提出主要物种假设(PSH)。使用两个更多基因座(线粒体 16S rDNA 和核内转录间隔区 2)的系统发育分析对 PSH 进行了重新评估,得出了 16 个保留的次要物种假设(RSSH)。七个 RSSH,由 79 个抽样群体中的 44 个代表,与被认为是新热带地区害虫的物种形态相关,在生态系统人为化不断发展的背景下,它们在新热带地区具有真正的入侵害虫潜力。还重建了基于组合比对(1426-1784bp)的多基因系统发育树,以识别祖先生态位和主要害虫谱系,揭示出圭亚那的害虫物种没有形成单系群。