Human DNA Variability Department, GENYO - Centre for Genomic and Oncological Research (Pfizer/University of Granada/Andalusian Regional Government), PTS Granada, Granada, Spain.
PLoS One. 2014 Jan 6;9(1):e84268. doi: 10.1371/journal.pone.0084268. eCollection 2014.
Chromatin insulators, such as the chicken β-globin locus control region hypersensitive site 4 (HS4), and scaffold/matrix attachment regions (SARs/MARs) have been incorporated separately or in combination into retroviral vectors (RVs) in order to increase transgene expression levels, avoid silencing and reduce expression variability. However, their incorporation into RVs either produces a reduction on titer and/or expression levels or do not have sufficient effect on stem cells. In order to develop an improved insulator we decided to combine SAR elements with HS4 insulators. We designed several synthetic shorter SAR elements containing 4 or 5 MAR/SARs recognition signatures (MRS) and studied their effects on a lentiviral vector (LV) expressing eGFP through the SFFV promoter (SE). A 388 bp SAR element containing 5 MRS, named SAR2, was as efficient or superior to the other SARs analyzed. SAR2 enhanced transgene expression and reduced silencing and variability on human embryonic stem cells (hESCs). We next compared the effect of different HS4-based insulators, the HS4-Core (250 bp), the HS4-Ext (400 bp) and the HS4-650 (650 bp). All HS4 elements reduced silencing and expression variability but they also had a negative effect on transgene expression levels and titer. In general, the HS4-650 element had a better overall effect. Based on these data we developed a chimeric insulator, IS2, combining the SAR2 and the HS4-650. When incorporated into the 3' LTR of the SE LV, the IS2 element was able to enhance expression, avoid silencing and reduce variability of expression on hESCs. Importantly, these effects were maintained after differentiation of the transduced hESCs toward the hematopoietic linage. Neither the HS4-650 nor the SAR2 elements had these effects. The IS2 element is therefore a novel insulator that confers expression stability and enhances expression of LVs on stem cells.
染色质绝缘子,如鸡β-球蛋白基因座控制区高敏感位点 4(HS4)和支架/基质附着区(SARs/MARs),已分别或组合被整合到逆转录病毒载体(RV)中,以提高转基因表达水平,避免沉默和降低表达变异性。然而,它们被整合到 RV 中要么会降低滴度和/或表达水平,要么对干细胞没有足够的效果。为了开发一种改进的绝缘子,我们决定将 SAR 元件与 HS4 绝缘子结合。我们设计了几个包含 4 或 5 个 MAR/SAR 识别签名(MRS)的合成较短的 SAR 元件,并通过 SFFV 启动子(SE)研究了它们对表达 eGFP 的慢病毒载体(LV)的影响。一个包含 5 个 MRS 的 388bp SAR 元件,命名为 SAR2,与分析的其他 SAR 一样有效或更有效。SAR2 增强了转基因在人胚胎干细胞(hESC)中的表达,并降低了沉默和变异性。接下来,我们比较了不同基于 HS4 的绝缘子的效果,即 HS4-Core(250bp)、HS4-Ext(400bp)和 HS4-650(650bp)。所有的 HS4 元件都降低了沉默和表达变异性,但它们也对转基因表达水平和滴度产生了负面影响。一般来说,HS4-650 元件的整体效果更好。基于这些数据,我们开发了一种嵌合绝缘子 IS2,它结合了 SAR2 和 HS4-650。当它被整合到 SE LV 的 3'LTR 中时,IS2 元件能够增强表达,避免沉默,并降低 hESC 中转基因表达的变异性。重要的是,这些效果在转导的 hESC 向造血谱系分化后仍然存在。HS4-650 或 SAR2 元件都没有这些效果。因此,IS2 元件是一种新的绝缘子,它赋予了 LV 在干细胞中的表达稳定性和增强表达。