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中国黄山宽鳍鱲(鲤形目:鲤科,丹亚科)的完整线粒体基因组

The complete mitochondrial genome of the Zacco platypus, Huangshan, China (Cypriniformes: Cyprinidae, subfamily Daninninae).

作者信息

Cheng Shuang-Huai, Yan Jin-Jin, Yan Yun-Zhi, Zhang Yi, Xia Meng-Ning, Liu Ying-Long, Lu Yan-Mei

机构信息

a College of Life Science, Anhui Normal University , Wuhu , P.R. China .

b Laboratory of Molecular Evolution and Biodiversity , College of Life Sciences, Anhui Normal University , Wuhu , P.R. China .

出版信息

Mitochondrial DNA. 2015;26(6):923-4. doi: 10.3109/19401736.2013.863292. Epub 2014 Jan 10.

Abstract

The mitochondrial genome of Zacco platypus (Cypriniformes: Cyprinidae, subfamily Daninninae) is a circular molecule of 16,611 bp in length, containing 37 typical animal mitochondrial genes: 13 protein-coding genes (PCGs), 2 ribosomal RNAs, 22 transfer RNAs and a D-loop region. Its gene order and arrangement are identical to the common type found in most fish mitogenomes. All PCGs start with a typical ATG codon except for COI which use GTG as start codon; all PCGs terminate in the common stop codon TAA or TAG, except for the COII which use single T as stop codon. The D-loop region is 928 bp long, located between tRNAPro and tRNAPhe genes. It contains some structures of repeated motifs and microsatellite-like elements characteristic of the Cyprinidae.

摘要

宽鳍鱲(鲤形目:鲤科,丹亚科)的线粒体基因组是一个长度为16,611 bp的环状分子,包含37个典型的动物线粒体基因:13个蛋白质编码基因(PCGs)、2个核糖体RNA、22个转运RNA和一个D-loop区域。其基因顺序和排列与大多数鱼类线粒体基因组中的常见类型相同。除COI以GTG作为起始密码子外,所有PCGs均以典型的ATG密码子开始;除COII以单个T作为终止密码子外,所有PCGs均以常见的终止密码子TAA或TAG结束。D-loop区域长928 bp,位于tRNAPro和tRNAPhe基因之间。它包含一些鲤科特有的重复基序和微卫星样元件结构。

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