Stella Stefano, Molina Rafael, Bertonatti Claudia, Juillerrat Alexandre, Montoya Guillermo
Macromolecular Crystallography Group, Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Calle de Melchor Fernández Almagro 3, 28029 Madrid, Spain.
Cellectis, 8 Rue de la Croix Jarry, 75013 Paris, France.
Acta Crystallogr F Struct Biol Commun. 2014 Jan;70(Pt 1):87-91. doi: 10.1107/S2053230X13033037. Epub 2013 Dec 24.
Different genome-editing strategies have fuelled the development of new DNA-targeting molecular tools allowing precise gene modifications. Here, the expression, purification, crystallization and preliminary X-ray diffraction of BurrH, a novel DNA-binding protein from Burkholderia rhizoxinica, are reported. Crystallization experiments of BurrH in its apo form and in complex with its target DNA yielded crystals suitable for X-ray diffraction analysis. The crystals of the apo form belonged to the primitive hexagonal space group P3(1) or its enantiomorph P3(2), with unit-cell parameters a = b = 73.28, c = 268.02 Å, α = β = 90, γ = 120°. The BurrH-DNA complex crystallized in the monoclinic space group P2(1), with unit-cell parameters a = 70.15, b = 95.83, c = 76.41 Å, α = γ = 90, β = 109.51°. The self-rotation function and the Matthews coefficient suggested the presence of two protein molecules per asymmetric unit in the apo crystals and one protein-DNA complex in the monoclinic crystals. The crystals diffracted to resolution limits of 2.21 and 2.65 Å, respectively, using synchrotron radiation.
不同的基因组编辑策略推动了新型DNA靶向分子工具的发展,这些工具可实现精确的基因修饰。本文报道了一种来自类产碱假单胞菌的新型DNA结合蛋白BurrH的表达、纯化、结晶及初步X射线衍射分析结果。对BurrH的无辅基形式及其与靶DNA的复合物进行结晶实验,得到了适合X射线衍射分析的晶体。无辅基形式的晶体属于原始六方空间群P3(1)或其对映体P3(2),晶胞参数为a = b = 73.28,c = 268.02 Å,α = β = 90,γ = 120°。BurrH-DNA复合物结晶于单斜空间群P2(1),晶胞参数为a = 70.15,b = 95.83,c = 76.41 Å,α = γ = 90,β = 109.51°。自旋转函数和马修斯系数表明,无辅基晶体的每个不对称单元中存在两个蛋白质分子,单斜晶体中存在一个蛋白质-DNA复合物。使用同步辐射,晶体分别衍射至2.21 Å和2.65 Å的分辨率极限。