• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

研究雀形目(鸟类)主要谱系多样化的时间。

Dating the diversification of the major lineages of Passeriformes (Aves).

机构信息

Department of Zoology, Swedish Museum of Natural History, Box 50007, SE-10405 Stockholm, Sweden.

出版信息

BMC Evol Biol. 2014 Jan 15;14:8. doi: 10.1186/1471-2148-14-8.

DOI:10.1186/1471-2148-14-8
PMID:24422673
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3917694/
Abstract

BACKGROUND

The avian Order Passeriformes is an enormously species-rich group, which comprises almost 60% of all living bird species. This diverse order is believed to have originated before the break-up of Gondwana in the late Cretaceous. However, previous molecular dating studies have relied heavily on the geological split between New Zealand and Antarctica, assumed to have occurred 85-82 Mya, for calibrating the molecular clock and might thus be circular in their argument.

RESULTS

This study provides a time-scale for the evolution of the major clades of passerines using seven nuclear markers, five taxonomically well-determined passerine fossils, and an updated interpretation of the New Zealand split from Antarctica 85-52 Mya in a Bayesian relaxed-clock approach. We also assess how different interpretations of the New Zealand-Antarctica vicariance event influence our age estimates. Our results suggest that the diversification of Passeriformes began in the late Cretaceous or early Cenozoic. Removing the root calibration for the New Zealand-Antarctica vicariance event (85-52 Mya) dramatically increases the 95% credibility intervals and leads to unrealistically old age estimates. We assess the individual characteristics of the seven nuclear genes analyzed in our study. Our analyses provide estimates of divergence times for the major groups of passerines, which can be used as secondary calibration points in future molecular studies.

CONCLUSIONS

Our analysis takes recent paleontological and geological findings into account and provides the best estimate of the passerine evolutionary time-scale currently available. This time-scale provides a temporal framework for further biogeographical, ecological, and co-evolutionary studies of the largest bird radiation, and adds to the growing support for a Cretaceous origin of Passeriformes.

摘要

背景

雀形目是一个物种极其丰富的鸟类目,约占现存鸟类物种的 60%。这个多样化的目被认为起源于白垩纪末期冈瓦纳大陆解体之前。然而,以前的分子定年研究严重依赖于新西兰和南极洲之间的地质分裂,该分裂被认为发生在 85-8200 万年前,用于校准分子钟,因此它们的论点可能是循环的。

结果

本研究利用 7 个核标记、5 个分类学上确定的雀形目化石以及对新西兰与南极洲 85-5200 万年前分裂的更新解释,为主要雀形目类群的进化提供了一个时间尺度。我们还评估了对新西兰-南极洲隔离事件的不同解释如何影响我们的年龄估计。我们的研究结果表明,雀形目的多样化始于白垩纪晚期或新生代早期。去除新西兰-南极洲隔离事件的根校准(85-5200 万年前)会极大地增加 95%置信区间,并导致不切实际的古老年龄估计。我们评估了我们研究中分析的 7 个核基因的个体特征。我们的分析为雀形目主要类群的分化时间提供了估计值,可作为未来分子研究的二级校准点。

结论

我们的分析考虑了最近的古生物学和地质学发现,并提供了目前可用的雀形目进化时间尺度的最佳估计。这个时间尺度为对最大的鸟类辐射的进一步生物地理学、生态学和协同进化研究提供了一个时间框架,并为雀形目起源于白垩纪的观点提供了更多支持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/548a2b29dab1/1471-2148-14-8-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/db02bab55f7b/1471-2148-14-8-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/0df936c5f773/1471-2148-14-8-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/2bb1720891f0/1471-2148-14-8-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/548a2b29dab1/1471-2148-14-8-4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/db02bab55f7b/1471-2148-14-8-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/0df936c5f773/1471-2148-14-8-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/2bb1720891f0/1471-2148-14-8-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6fa1/3917694/548a2b29dab1/1471-2148-14-8-4.jpg

相似文献

1
Dating the diversification of the major lineages of Passeriformes (Aves).研究雀形目(鸟类)主要谱系多样化的时间。
BMC Evol Biol. 2014 Jan 15;14:8. doi: 10.1186/1471-2148-14-8.
2
Earth history and the passerine superradiation.地球历史与雀形目鸟类的超级辐射。
Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7916-7925. doi: 10.1073/pnas.1813206116. Epub 2019 Apr 1.
3
A Paleogene origin for crown passerines and the diversification of the Oscines in the New World.新域雀形目鸟类的古近纪起源及鸣禽在新世界的多样化。
Mol Phylogenet Evol. 2015 Jul;88:1-15. doi: 10.1016/j.ympev.2015.03.018. Epub 2015 Mar 30.
4
Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages.线粒体DNA有力支持现代鸟类谱系起源于白垩纪。
BMC Biol. 2008 Jan 28;6:6. doi: 10.1186/1741-7007-6-6.
5
New Zealand Passerines Help Clarify the Diversification of Major Songbird Lineages during the Oligocene.新西兰雀形目鸟类有助于阐明渐新世主要鸣禽谱系的多样化过程。
Genome Biol Evol. 2015 Oct 15;7(11):2983-95. doi: 10.1093/gbe/evv196.
6
Phylogeny and classification of the New World suboscines (Aves, Passeriformes).新大陆亚鸣禽(鸟类,雀形目)的系统发育与分类
Zootaxa. 2013 Feb 7;3613:1-35. doi: 10.11646/zootaxa.3613.1.1.
7
Evolutionary divergence times in the Annonaceae: evidence of a late Miocene origin of Pseuduvaria in Sundaland with subsequent diversification in New Guinea.番荔枝科的进化分歧时间:巽他群岛假紫玉盘属植物起源于中新世晚期并随后在新几内亚多样化的证据。
BMC Evol Biol. 2009 Jul 2;9:153. doi: 10.1186/1471-2148-9-153.
8
Reassessing the temporal evolution of orchids with new fossils and a Bayesian relaxed clock, with implications for the diversification of the rare South American genus Hoffmannseggella (Orchidaceae: Epidendroideae).利用新化石和贝叶斯松弛时钟重新评估兰花的时间演化,这对南美的稀有属 Hoffmannseggella(兰科:Epidendroideae)的多样化具有重要意义。
BMC Evol Biol. 2010 Jun 14;10:177. doi: 10.1186/1471-2148-10-177.
9
Going to extremes: contrasting rates of diversification in a recent radiation of new world passerine birds.走向极端:新大陆雀科鸟类近期辐射中新物种的多样化速率对比。
Syst Biol. 2013 Mar;62(2):298-320. doi: 10.1093/sysbio/sys094. Epub 2012 Dec 9.
10
Supermatrix phylogeny and biogeography of the Australasian Meliphagides radiation (Aves: Passeriformes).澳大拉西亚吸蜜鸟辐射演化(雀形目:鸣禽)的超矩阵系统发育与生物地理学
Mol Phylogenet Evol. 2017 Feb;107:516-529. doi: 10.1016/j.ympev.2016.12.021. Epub 2016 Dec 23.

引用本文的文献

1
The MHC (Major Histocmpatibility Complex) Exceptional Molecules of Birds and Their Relationship to Diseases.鸟类的主要组织相容性复合体(MHC)特殊分子及其与疾病的关系。
Int J Mol Sci. 2025 Apr 16;26(8):3767. doi: 10.3390/ijms26083767.
2
Evolution of the syrinx of Apodiformes, including the vocal-learning Trochilidae (Aves: Strisores).雨燕目(包括有发声学习能力的蜂鸟科,鸟类:夜鹰目)的鸣管演化
Zool J Linn Soc. 2024 Feb 17;202(3):zlae001. doi: 10.1093/zoolinnean/zlae001. eCollection 2024 Nov.
3
Selected Lark Mitochondrial Genomes Provide Insights into the Evolution of Second Control Region with Tandem Repeats in Alaudidae (Aves, Passeriformes).

本文引用的文献

1
Phylogeny and phylogenetic classification of the tyrant flycatchers, cotingas, manakins, and their allies (Aves: Tyrannides).霸鹟、伞鸟、侏儒鸟及其近缘鸟类(雀形目:霸鹟亚目)的系统发育与系统分类
Cladistics. 2009 Oct;25(5):429-467. doi: 10.1111/j.1096-0031.2009.00254.x. Epub 2009 Jul 10.
2
Phylogeny and phylogenetic classification of the antbirds, ovenbirds, woodcreepers, and allies (Aves: Passeriformes: infraorder Furnariides).蚁鸟、灶鸟、砍林鸟及近缘鸟类(雀形目:雀形目:灶鸟亚目)的系统发育与系统分类
Cladistics. 2009 Aug;25(4):386-405. doi: 10.1111/j.1096-0031.2009.00259.x. Epub 2009 Jun 15.
3
Phylogeny and classification of the New World suboscines (Aves, Passeriformes).
所选云雀线粒体基因组为探讨百灵科(雀形目,鸟类)中具有串联重复序列的第二控制区的进化提供了见解。
Life (Basel). 2024 Jul 15;14(7):881. doi: 10.3390/life14070881.
4
Mendelian nightmares: the germline-restricted chromosome of songbirds.孟德尔噩梦:鸣禽的生殖系限定染色体。
Chromosome Res. 2022 Sep;30(2-3):255-272. doi: 10.1007/s10577-022-09688-3. Epub 2022 Apr 13.
5
Climate variability and parent nesting strategies influence gas exchange across avian eggshells.气候变异性和亲鸟筑巢策略会影响鸟类蛋壳的气体交换。
Proc Biol Sci. 2021 Jun 30;288(1953):20210823. doi: 10.1098/rspb.2021.0823. Epub 2021 Jun 16.
6
An Unbiased Molecular Approach Using 3'-UTRs Resolves the Avian Family-Level Tree of Life.一种基于 3'UTR 的无偏分子方法解决了鸟类科水平的生命之树。
Mol Biol Evol. 2021 Jan 4;38(1):108-127. doi: 10.1093/molbev/msaa191.
7
The molecular cytogenetic characterization of Conopophaga lineata indicates a common chromosome rearrangement in the Parvorder Furnariida (Aves, Passeriformes).细纹食蚊鸟的分子细胞遗传学特征表明,灶鸟亚目(鸟类,雀形目)存在一种常见的染色体重排。
Genet Mol Biol. 2020 Jun 12;43(3):e20200018. doi: 10.1590/1678-4685-GMB-2020-0018. eCollection 2020.
8
Resolving Phylogenetic Relationships within Passeriformes Based on Mitochondrial Genes and Inferring the Evolution of Their Mitogenomes in Terms of Duplications.基于线粒体基因解析雀形目内部的系统发育关系,并根据重复推断它们的线粒体基因组的进化。
Genome Biol Evol. 2019 Oct 1;11(10):2824-2849. doi: 10.1093/gbe/evz209.
9
Earth history and the passerine superradiation.地球历史与雀形目鸟类的超级辐射。
Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7916-7925. doi: 10.1073/pnas.1813206116. Epub 2019 Apr 1.
10
The influence of biogeographic history on the functional and phylogenetic diversity of passerine birds in savannas and forests of the Brazilian Amazon.生物地理历史对巴西亚马逊地区稀树草原和森林中雀形目鸟类功能和系统发育多样性的影响。
Ecol Evol. 2018 Mar 3;8(7):3617-3627. doi: 10.1002/ece3.3904. eCollection 2018 Apr.
新大陆亚鸣禽(鸟类,雀形目)的系统发育与分类
Zootaxa. 2013 Feb 7;3613:1-35. doi: 10.11646/zootaxa.3613.1.1.
4
A total-evidence approach to dating with fossils, applied to the early radiation of the hymenoptera.基于化石的全证据年代测定方法及其在膜翅目早期辐射中的应用
Syst Biol. 2012 Dec 1;61(6):973-99. doi: 10.1093/sysbio/sys058. Epub 2012 Jun 20.
5
Molecular phylogeny of African bush-shrikes and allies: tracing the biogeographic history of an explosive radiation of corvoid birds.非洲丛鹟及其亲缘的分子系统发育:追踪鸣禽科鸟类爆发性辐射的生物地理历史。
Mol Phylogenet Evol. 2012 Jul;64(1):93-105. doi: 10.1016/j.ympev.2012.03.007. Epub 2012 Mar 28.
6
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.
7
The probability of correctly resolving a split as an experimental design criterion in phylogenetics.作为系统发生学中实验设计标准的正确分辨分歧的概率。
Syst Biol. 2012 Oct;61(5):811-21. doi: 10.1093/sysbio/sys033. Epub 2012 Feb 15.
8
Best practices for justifying fossil calibrations.验证化石校准的最佳实践。
Syst Biol. 2012 Mar;61(2):346-59. doi: 10.1093/sysbio/syr107. Epub 2011 Nov 21.
9
Molecular and morphological evidences place the extinct New Zealand endemic Turnagra capensis in the Oriolidae.分子和形态学证据将已灭绝的新西兰特有物种卡彭氏弯嘴犀鸟置于黄鹂科中。
Mol Phylogenet Evol. 2012 Jan;62(1):414-26. doi: 10.1016/j.ympev.2011.10.013. Epub 2011 Oct 25.
10
The phylogenetic relationships and generic limits of finches (Fringillidae).雀形目鸟类(雀科)的系统发育关系和属的界限。
Mol Phylogenet Evol. 2012 Feb;62(2):581-96. doi: 10.1016/j.ympev.2011.10.002. Epub 2011 Oct 17.