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抗利什曼原虫植物化学酚类化合物:潜在蛋白靶标的分子对接。

Antileishmanial phytochemical phenolics: molecular docking to potential protein targets.

机构信息

Department of Chemistry & Biochemistry, Jackson State University, Jackson, MS 39217, USA.

Department of Chemistry, University of Alabama in Huntsville, Huntsville, AL 35899, USA.

出版信息

J Mol Graph Model. 2014 Mar;48:105-17. doi: 10.1016/j.jmgm.2013.12.010. Epub 2014 Jan 8.

Abstract

A molecular docking analysis has been carried out to examine potential Leishmania protein targets of antiprotozoal plant-derived polyphenolic compounds. A total of 352 phenolic phytochemicals, including 10 aurones, six cannabinoids, 34 chalcones, 20 chromenes, 52 coumarins, 92 flavonoids, 41 isoflavonoids, 52 lignans, 25 quinones, eight stilbenoids, nine xanthones, and three miscellaneous phenolic compounds, were used in the virtual screening study using 24 Leishmania enzymes (52 different protein structures from the Protein Data Bank). Noteworthy protein targets were Leishmania dihydroorotate dehydrogenase, N-myristoyl transferase, phosphodiesterase B1, pteridine reductase, methionyl-tRNA synthetase, tyrosyl-tRNA synthetase, uridine diphosphate-glucose pyrophosphorylase, nicotinamidase, and glycerol-3-phosphate dehydrogenase. Based on in-silico analysis of antiparasitic polyphenolics in this study, two aurones, one chalcone, five coumarins, six flavonoids, one isoflavonoid, three lignans, and one stilbenoid, can be considered to be promising drug leads worthy of further investigation.

摘要

进行了分子对接分析,以研究抗原生动物植物衍生多酚化合物的潜在利什曼原虫蛋白靶标。使用 24 种利什曼酶(来自蛋白质数据库的 52 种不同蛋白质结构)进行虚拟筛选研究,共使用了 352 种酚类植物化学物质,包括 10 种奥罗酮、6 种大麻素、34 种查耳酮、20 种色烯、52 种香豆素、92 种类黄酮、41 种异黄酮、52 种木脂素、25 种醌、8 种芪类、9 种酮和 3 种杂酚类化合物。值得注意的蛋白靶标是利什曼原虫二氢乳清酸脱氢酶、N-豆蔻酰转移酶、磷酸二酯酶 B1、蝶呤还原酶、甲硫氨酸 tRNA 合成酶、酪氨酸 tRNA 合成酶、尿苷二磷酸葡萄糖焦磷酸化酶、烟酰胺酶和甘油-3-磷酸脱氢酶。基于本研究中抗寄生虫多酚的计算机分析,可以考虑两种奥罗酮、一种查耳酮、五种香豆素、六种类黄酮、一种异黄酮、三种木脂素和一种芪类,作为有前途的药物先导物,值得进一步研究。

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