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通过微卫星分析研究中国杜氏利什曼原虫复合种的遗传多样性。

Genetic diversity of Leishmania donovani/infantum complex in China through microsatellite analysis.

机构信息

Laboratory of Parasitology, Department of Disease Control, Graduate School of Veterinary Medicine, Hokkaido University, Sapporo, Japan; Department of Parasitology, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh 2202, Bangladesh.

Department of Collaboration and Education, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.

出版信息

Infect Genet Evol. 2014 Mar;22:112-9. doi: 10.1016/j.meegid.2014.01.019. Epub 2014 Jan 27.

Abstract

The Leishmania strains from different epidemic areas in China were assessed for their genetic relationship. Twenty-nine strains of Leishmania infantum isolated from 1950 to 2001 were subjected to multilocus microsatellite typing (MLMT) using 14 highly polymorphic microsatellite markers. Twenty-two MLMT profiles were recognized among the 29 L. infantum strains, which differed from one another in 13 loci. Bayesian model-based and distance-based analysis of the data inferred two main populations in China. Sixteen strains belonged to one population, which also comprised previously characterized strains of L. infantum non-MON1 and Leishmania donovani. The parasites within this population are assignable to a distinct cluster that is clearly separable from the populations of L. donovani elsewhere, i.e. India, Sri Lanka and East Africa, and L. infantum non-MON1 from Europe. The remaining 13 Chinese strains grouped together with strains of L. infantum MON1 into another population, but formed a separate cluster which genetically differs from the populations of L. infantum MON1 from Europe, the Middle East, Central Asia and North Africa. The existence of distinct groups of L. infantum MON1 and non-MON1/L. donovani suggests that the extant parasites in China may have been restricted there, but not recently introduced from elsewhere.

摘要

本研究对来自中国不同流行地区的利什曼原虫株进行了遗传关系评估。采用 14 个高度多态性的微卫星标记,对 1950 年至 2001 年间分离的 29 株婴儿利什曼原虫进行了多位点微卫星分型(MLMT)。在 29 株婴儿利什曼原虫中,有 22 种 MLMT 图谱,在 13 个基因座上存在差异。贝叶斯模型和基于距离的数据分析推断,中国存在两个主要种群。16 株属于一个种群,其中还包括以前鉴定的非 MON1 婴儿利什曼原虫和利什曼原虫 donovani 株。该种群内的寄生虫可归属于一个独特的聚类,与其他地区(即印度、斯里兰卡和东非)的利什曼原虫 donovani 以及欧洲的非 MON1 婴儿利什曼原虫种群明显分离。其余 13 株中国株与 MON1 婴儿利什曼原虫株一起形成另一个种群,但形成了一个与欧洲、中东、中亚和北非的 MON1 婴儿利什曼原虫种群遗传上不同的独立聚类。MON1 婴儿利什曼原虫和非 MON1/L. donovani 存在明显的群体,表明中国现存的寄生虫可能一直局限于中国,但并非最近从其他地方传入。

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