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Solid-phase peptide synthesis and solid-state NMR spectroscopy of [Ala3-15N][Val1]gramicidin A.[丙氨酸3-15N][缬氨酸1]短杆菌肽A的固相肽合成及固态核磁共振光谱
Proc Natl Acad Sci U S A. 1988 Mar;85(5):1384-8. doi: 10.1073/pnas.85.5.1384.
2
Solid-state 15N NMR of oriented lipid bilayer bound gramicidin A'.定向脂质双层结合短杆菌肽A的固态15N核磁共振
Biochemistry. 1987 Oct 20;26(21):6621-6. doi: 10.1021/bi00395a009.
3
Tryptophans in membrane proteins: indole ring orientations and functional implications in the gramicidin channel.膜蛋白中的色氨酸:吲哚环取向及其在短杆菌肽通道中的功能意义
Biochemistry. 1993 Jul 13;32(27):7035-47. doi: 10.1021/bi00078a032.
4
Two-dimensional rotational-echo double resonance of Val1-[1-13C]Gly2-[15N]Ala3-gramicidin A in multilamellar dimyristoylphosphatidylcholine dispersions.多层二肉豆蔻酰磷脂酰胆碱分散体系中Val1-[1-13C]Gly2-[15N]Ala3-短杆菌肽A的二维旋转回波双共振
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5
Determination of the structure of a membrane-incorporated ion channel. Solid-state nuclear magnetic resonance studies of gramicidin A.膜整合离子通道结构的测定。短杆菌肽A的固态核磁共振研究。
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Deuterium NMR of Val1...(2-2H)Ala3...gramicidin A in oriented DMPC bilayers.在定向的二肉豆蔻酰磷脂酰胆碱(DMPC)双层膜中,缬氨酸1...(2-2H)丙氨酸3...短杆菌肽A的氘核磁共振谱。
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7
Solid-state nuclear magnetic resonance derived model for dynamics in the polypeptide backbone of the gramicidin A channel.源自固态核磁共振的短杆菌肽A通道多肽主链动力学模型。
J Mol Biol. 1991 Apr 5;218(3):621-37. doi: 10.1016/0022-2836(91)90706-c.
8
Solid phase peptide synthesis of 15N-gramicidins A, B, and C and high performance liquid chromatographic purification.15N-短杆菌肽A、B和C的固相肽合成及高效液相色谱纯化
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Experimental determination of torsion angles in the polypeptide backbone of the gramicidin A channel by solid state nuclear magnetic resonance.通过固态核磁共振实验测定短杆菌肽A通道多肽主链中的扭转角
J Mol Biol. 1991 Apr 5;218(3):607-19. doi: 10.1016/0022-2836(91)90705-b.
10
Deuterium NMR of 2HCO-Val1...gramicidin A and 2HCO-Val1-D-Leu2...gramicidin A in oriented DMPC bilayers.在定向的二肉豆蔻酰磷脂酰胆碱(DMPC)双层膜中2HCO - Val1...短杆菌肽A和2HCO - Val1 - D - Leu2...短杆菌肽A的氘核磁共振。
Biochemistry. 1990 May 1;29(17):4156-66. doi: 10.1021/bi00469a019.

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Solid-state 19F-NMR analysis of 19F-labeled tryptophan in gramicidin A in oriented membranes.对定向膜中短杆菌肽A内19F标记色氨酸进行固态19F核磁共振分析。
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Noncontact dipole effects on channel permeation. VI. 5F- and 6F-Trp gramicidin channel currents.非接触偶极子对通道渗透的影响。VI. 5F-和6F-色氨酸短杆菌肽通道电流。
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本文引用的文献

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Preparation and properties of Nalpha-9-fluorenylmethyloxycarbonylamino acids bearing tert.-butyl side chain protection.带有叔丁基侧链保护基的Nα-9-芴甲氧羰基氨基酸的制备及其性质
Int J Pept Protein Res. 1980 Jan;15(1):59-66. doi: 10.1111/j.1399-3011.1980.tb02550.x.
2
Stable isolated symmetrical anhydrides of N alpha-9-fluorenylmethyloxycarbonylamino acids in solid-phase peptide synthesis. Methionine-enkephalin synthesis as an example.固相肽合成中Nα-9-芴甲氧羰基氨基酸的稳定分离对称酸酐。以甲硫氨酸脑啡肽合成为例。
Int J Pept Protein Res. 1981 Sep;18(3):237-41.
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Synthesis of the antibacterial peptide cecropin A (1-33).抗菌肽天蚕素A(1 - 33)的合成
Biochemistry. 1982 Sep 28;21(20):5020-31. doi: 10.1021/bi00263a028.
4
Ion-specific diffusion rates through transmembrane protein channels. A molecular dynamics study.离子通过跨膜蛋白通道的特异性扩散速率:一项分子动力学研究
Biophys Chem. 1983 Nov;18(4):323-37. doi: 10.1016/0301-4622(83)80045-3.
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Structure and dynamics of ion transport through gramicidin A.离子通过短杆菌肽A的转运结构与动力学
Biophys J. 1984 Aug;46(2):229-48. doi: 10.1016/S0006-3495(84)84016-3.
6
Synthesis and characterization of (1-13C) Phe9 gramicidin A. Effects of side chain variations.(1-¹³C)苯丙氨酸⁹短杆菌肽A的合成与表征。侧链变异的影响。
Int J Pept Protein Res. 1983 Sep;22(3):341-7. doi: 10.1111/j.1399-3011.1983.tb02100.x.
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Use of synthetic gramicidins in the determination of channel structure and mechanism.合成短杆菌肽在通道结构与机制测定中的应用。
Int J Pept Protein Res. 1983 Jan;21(1):16-23. doi: 10.1111/j.1399-3011.1983.tb03073.x.
8
Synthesis and characterization of 1-(13) C-D X Leu12, 14 gramicidin A.1-(13)C-D X亮氨酸12、14短杆菌肽A的合成与表征
Int J Pept Protein Res. 1982 Feb;19(2):162-71.
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Solid-phase peptide synthesis of somatostatin using mild base cleavage of N alpha-9-fluorenylmethyloxycarbonylamino acids.使用Nα-9-芴甲氧羰基氨基酸的温和碱裂解进行生长抑素的固相肽合成。
Int J Pept Protein Res. 1980 May;15(5):485-94. doi: 10.1111/j.1399-3011.1980.tb02926.x.
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A reversible chemical modification of the tryptophan residue.色氨酸残基的可逆化学修饰。
Biochim Biophys Acta. 1967 Dec 12;147(3):453-61. doi: 10.1016/0005-2795(67)90005-0.

[丙氨酸3-15N][缬氨酸1]短杆菌肽A的固相肽合成及固态核磁共振光谱

Solid-phase peptide synthesis and solid-state NMR spectroscopy of [Ala3-15N][Val1]gramicidin A.

作者信息

Fields G B, Fields C G, Petefish J, Van Wart H E, Cross T A

机构信息

Department of Chemistry, Florida State University, Tallahassee 32306-3006.

出版信息

Proc Natl Acad Sci U S A. 1988 Mar;85(5):1384-8. doi: 10.1073/pnas.85.5.1384.

DOI:10.1073/pnas.85.5.1384
PMID:2449690
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC279775/
Abstract

[Ala3-15N][Val1]Gramicidin A has been prepared by solid-phase peptide synthesis and studied by solid-state 15N nuclear magnetic resonance spectroscopy. The synthesis of desformyl[Ala3-15N][Val1]gramicidin A employed N-hydroxysuccinimide esters of 9-fluorenylmethoxycarbonyl-N alpha-amino acids and completely avoided the use of acid. Since deblocking was done with piperidine and the peptide was removed from the resin by treatment with ethanolamine, this synthetic protocol prevented oxidation of the indole rings of this tryptophan-rich peptide and reduced truncations produced by acid hydrolysis. After formylation and purification by anion-exchange and high-pressure liquid chromatography, the peptide was obtained in an overall yield of 30%. Solid-state 15N nuclear magnetic resonance spectra of this peptide and uniformly labeled [15N]gramicidin A' oriented in hydrated lipid bilayers have been obtained, allowing unambiguous assignment of the [15N]Ala3 resonance in the latter. The solid-state 15N nuclear magnetic resonance experiments provide evidence that [Val1]gramicidin A is rotating about an axis that is perpendicular to the plane of the lipid bilayer and that the N--H axis is nearly parallel with the rotational axis. This study demonstrates that site-specifically labeled [15N]gramicidin A analogs prepared by solid-phase peptide synthesis are valuable tools in the study of the solid-state nuclear magnetic resonance spectra of samples in oriented lipid bilayers.

摘要

[丙氨酸3 - 15N][缬氨酸1]短杆菌肽A已通过固相肽合成法制备,并通过固态15N核磁共振光谱进行了研究。去甲酰基[丙氨酸3 - 15N][缬氨酸1]短杆菌肽A的合成采用了9 - 芴甲氧羰基 - Nα - 氨基酸的N - 羟基琥珀酰亚胺酯,完全避免了酸的使用。由于脱保护是用哌啶进行的,并且通过用乙醇胺处理从树脂上除去肽,这种合成方案防止了这种富含色氨酸的肽的吲哚环氧化,并减少了酸水解产生的截短。经过甲酰化以及阴离子交换和高压液相色谱纯化后,得到该肽的总产率为30%。已获得该肽以及在水合脂质双层中取向的均匀标记的[15N]短杆菌肽A'的固态15N核磁共振光谱,从而能够明确确定后者中[15N]丙氨酸3的共振峰。固态15N核磁共振实验提供了证据,表明[缬氨酸1]短杆菌肽A围绕垂直于脂质双层平面的轴旋转,并且N - H轴几乎与旋转轴平行。这项研究表明,通过固相肽合成制备的位点特异性标记的[15N]短杆菌肽A类似物是研究取向脂质双层中样品的固态核磁共振光谱的有价值工具。