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质粒从变形菌中的共轭作用作为蓝藻中外源基因起源的证据。

Plasmid conjugation from proteobacteria as evidence for the origin of xenologous genes in cyanobacteria.

机构信息

Instituto de Biomedicina y Biotecnología de Cantabria IBBTEC, CSIC-Universidad de Cantabria-SODERCAN, Santander, Spain.

出版信息

J Bacteriol. 2014 Apr;196(8):1551-9. doi: 10.1128/JB.01464-13. Epub 2014 Feb 7.

Abstract

Comparative genomics have shown that 5% of Synechococcus elongatus PCC 7942 genes are of probable proteobacterial origin. To investigate the role of interphylum conjugation in cyanobacterial gene acquisition, we tested the ability of a set of prototype proteobacterial conjugative plasmids (RP4, pKM101, R388, R64, and F) to transfer DNA from Escherichia coli to S. elongatus. A series of BioBrick-compatible, mobilizable shuttle vectors was developed. These vectors were based on the putative origin of replication of the Synechococcus resident plasmid pANL. Not only broad-host-range plasmids, such as RP4 and R388, but also narrower-host-range plasmids, such as pKM101, all encoding MPFT-type IV secretion systems, were able to transfer plasmid DNA from E. coli to S. elongatus by conjugation. Neither MPFF nor MPFI could be used as interphylum DNA delivery agents. Reciprocally, pANL-derived cointegrates could be introduced in E. coli by electroporation, where they conferred a functional phenotype. These results suggest the existence of potentially ample channels of gene flow between proteobacteria and cyanobacteria and point to MPFT-based interphylum conjugation as a potential mechanism to explain the proteobacterial origin of a majority of S. elongatus xenologous genes.

摘要

比较基因组学表明,聚球藻 PCC 7942 中有 5%的基因可能来自于变形菌。为了研究种间 conjugation 在蓝藻基因获得中的作用,我们测试了一组原型的变形菌接合质粒(RP4、pKM101、R388、R64 和 F)将 DNA 从大肠杆菌转移到聚球藻的能力。我们开发了一系列兼容 BioBrick 的、可移动的穿梭载体。这些载体基于聚球藻驻留质粒 pANL 的假定复制起点。不仅 broad-host-range 质粒,如 RP4 和 R388,而且还有较窄宿主范围的质粒,如 pKM101,都能够通过 conjugation 将质粒 DNA 从大肠杆菌转移到聚球藻。MPFF 和 MPFI 都不能用作种间 DNA 传递剂。相反,pANL 衍生的 cointegrates 可以通过电穿孔引入大肠杆菌,在那里它们赋予了功能性表型。这些结果表明,变形菌和蓝藻之间存在潜在的大量基因流动通道,并指出基于 MPFT 的种间 conjugation 可能是解释聚球藻大多数异源基因来源于变形菌的一种潜在机制。

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