Lu Peter J, Shutman Maor, Sloutskin Eli, Butenko Alexander V
Opt Express. 2013 Dec 16;21(25):30755-63. doi: 10.1364/OE.21.030755.
Computerized image-analysis routines deployed widely to locate and track the positions of particles in microscope images include several steps where images are convolved with kernels to remove noise. In many common implementations, some kernels are rotationally asymmetric. Here we show that the use of these asymmetric kernels creates significant artifacts, distorting apparent particle positions in a way that gives the artificial appearance of orientational crystalline order, even in such fully-disordered isotropic systems as simple fluids of hard-sphere-like colloids. We rectify this problem by replacing all asymmetric kernels with rotationally-symmetric kernels, which does not impact code performance. We show that these corrected codes locate particle positions properly, restoring measured isotropy to colloidal fluids. We also investigate rapidly-formed colloidal sediments, and with the corrected codes show that these sediments, often thought to be amorphous, may exhibit strong orientational correlations among bonds between neighboring colloidal particles.
广泛应用于在显微镜图像中定位和跟踪粒子位置的计算机化图像分析程序包括几个步骤,即图像与内核进行卷积以去除噪声。在许多常见的实现中,一些内核是旋转不对称的。我们在此表明,使用这些不对称内核会产生显著的伪影,以一种会产生取向晶体有序的假象的方式扭曲表观粒子位置,即使在诸如硬球状胶体的简单流体这样完全无序的各向同性系统中也是如此。我们通过用旋转对称内核替换所有不对称内核来纠正这个问题,这不会影响代码性能。我们表明,这些经过修正的代码能够正确定位粒子位置,恢复对胶体流体测量的各向同性。我们还研究了快速形成的胶体沉积物,并且通过修正后的代码表明,这些通常被认为是无定形的沉积物可能在相邻胶体粒子之间的键之间表现出强烈的取向相关性。