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拟南芥木聚糖中双糖侧链2-O-α-D-吡喃半乳糖基-α-D-葡糖醛酸的鉴定

Identification of a disaccharide side chain 2-O-α-D-galactopyranosyl-α-D-glucuronic acid in Arabidopsis xylan.

作者信息

Zhong Ruiqin, Teng Quincy, Lee Chanhui, Ye Zheng-Hua

机构信息

Department of Plant Biology; University of Georgia; Athens, GA USA.

Department of Pharmaceutical and Biomedical Sciences; University of Georgia; Athens, GA USA.

出版信息

Plant Signal Behav. 2014;9(2):e27933. doi: 10.4161/psb.27933. Epub 2014 Feb 12.

DOI:10.4161/psb.27933
PMID:24521940
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4091222/
Abstract

Arabidopsis xylan consists of a linear chain of β-1,4-linked D-xylosyl residues, about 10% of which are substituted with single residues of α-D-glucuronic acid (GlcA) or 4-O-methyl-α-D-glucuronic acid (MeGlcA) at O-2. In addition, about 60% of xylosyl residues are acetylated at O-2 and/or O-3. Previous studies have identified a number of genes responsible for elongation of the xylan backbone, addition of the GlcA substituents, and methylation of the GlcA residues. Yuan et al. (2013) have recently reported that the 2-O- and 3-O-monoacetylation of xylosyl residues in Arabidopsis xylan requires a DUF231 domain-containing protein, ESKIMO1 (ESK1), and proposed that ESK1 and its homologs are putative acetyltransferases responsible for xylan acetylation. It was noticed that the (1)H nuclear magnetic resonance (NMR) spectra of the acetylated xylan from the esk1 mutant and the wild-type Arabidopsis exhibited a prominent proton signal peak at 5.42 ppm in addition to resonances corresponding to known acetylated structural groups of xylan. Here, we performed detailed structural investigation of wild-type Arabidopsis acetylated xylan using 2-dimensional (1)H- (1)H and (1)H- (13)C NMR spectroscopy and found that the signal peak at 5.42 ppm in the (1)H NMR spectrum was attributed to GlcA residues substituted at O-2 with α-D-galactose (Gal), indicating the presence of Gal-GlcA disaccharide side chains in Arabidopsis xylan. This finding was further supported by analysis of endoxylanase-digested xylan using matrix-assisted laser desorption ionization-time-of-flight mass spectrometry. Our study demonstrates that Arabidopsis xylan contains Gal-GlcA disaccharide side chains in addition to GlcA, MeGlcA, and acetyl substitutions.

摘要

拟南芥木聚糖由β-1,4-连接的D-木糖基残基线性链组成,其中约10%在O-2位被单个α-D-葡萄糖醛酸(GlcA)或4-O-甲基-α-D-葡萄糖醛酸(MeGlcA)残基取代。此外,约60%的木糖基残基在O-2和/或O-3位被乙酰化。先前的研究已经鉴定出许多负责木聚糖主链延伸、GlcA取代基添加以及GlcA残基甲基化的基因。袁等人(2013年)最近报道,拟南芥木聚糖中木糖基残基的2-O-和3-O-单乙酰化需要一种含有DUF231结构域的蛋白质,即爱斯基摩1(ESK1),并提出ESK1及其同源物是负责木聚糖乙酰化的假定乙酰转移酶。值得注意的是,来自esk1突变体和野生型拟南芥的乙酰化木聚糖的(1)H核磁共振(NMR)谱除了对应于木聚糖已知乙酰化结构基团的共振外,在5.42 ppm处还显示出一个突出的质子信号峰。在这里,我们使用二维(1)H-(1)H和(1)H-(13)C NMR光谱对野生型拟南芥乙酰化木聚糖进行了详细的结构研究,发现(1)H NMR谱中5.42 ppm处的信号峰归因于在O-2位被α-D-半乳糖(Gal)取代的GlcA残基,这表明拟南芥木聚糖中存在Gal-GlcA二糖侧链。使用基质辅助激光解吸电离飞行时间质谱对木聚糖内切酶消化的木聚糖进行分析进一步支持了这一发现。我们的研究表明,拟南芥木聚糖除了含有GlcA、MeGlcA和乙酰取代外,还含有Gal-GlcA二糖侧链。

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本文引用的文献

1
The Arabidopsis DUF231 domain-containing protein ESK1 mediates 2-O- and 3-O-acetylation of xylosyl residues in xylan.拟南芥 DUF231 结构域蛋白 ESK1 介导木聚糖中木糖基残基的 2-O-和 3-O-乙酰化。
Plant Cell Physiol. 2013 Jul;54(7):1186-99. doi: 10.1093/pcp/pct070. Epub 2013 May 9.
2
Three Arabidopsis DUF579 domain-containing GXM proteins are methyltransferases catalyzing 4-o-methylation of glucuronic acid on xylan.三个拟南芥 DUF579 结构域蛋白 GXM 是甲基转移酶,可催化木聚糖上葡萄糖醛酸的 4-o-甲基化。
Plant Cell Physiol. 2012 Nov;53(11):1934-49. doi: 10.1093/pcp/pcs138. Epub 2012 Oct 8.
3
4-O-methylation of glucuronic acid in Arabidopsis glucuronoxylan is catalyzed by a domain of unknown function family 579 protein.拟南芥木葡聚糖中葡萄糖醛酸的 4-O-甲基化是由一个未知功能家族 579 蛋白的结构域催化的。
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Arabidopsis GUX proteins are glucuronyltransferases responsible for the addition of glucuronic acid side chains onto xylan.拟南芥 GUX 蛋白是负责将葡萄糖醛酸侧链添加到木聚糖上的糖基转移酶。
Plant Cell Physiol. 2012 Jul;53(7):1204-16. doi: 10.1093/pcp/pcs064. Epub 2012 Apr 25.
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Analyst. 2012 May 7;137(9):2226-32. doi: 10.1039/c2an16251b. Epub 2012 Mar 21.
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The four Arabidopsis reduced wall acetylation genes are expressed in secondary wall-containing cells and required for the acetylation of xylan.拟南芥的四个减少细胞壁乙酰化基因在含有次生壁的细胞中表达,并且需要对木聚糖进行乙酰化。
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The Arabidopsis family GT43 glycosyltransferases form two functionally nonredundant groups essential for the elongation of glucuronoxylan backbone.拟南芥家族 GT43 糖基转移酶形成两个功能上非冗余的亚组,对于半乳葡甘露聚糖主链的延伸是必不可少的。
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Down-regulation of PoGT47C expression in poplar results in a reduced glucuronoxylan content and an increased wood digestibility by cellulase.杨树中PoGT47C表达的下调导致葡糖醛酸木聚糖含量降低,且纤维素酶对木材的消化率提高。
Plant Cell Physiol. 2009 Jun;50(6):1075-89. doi: 10.1093/pcp/pcp060. Epub 2009 Apr 23.