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利用底物类似物:乙基丙二酰辅酶A对甲基丙二酰辅酶A变位酶反应机制的研究。

Investigation of the mechanism of the methylmalonyl-CoA mutase reaction with the substrate analogue: ethylmalonyl-CoA.

作者信息

Rétey J, Smith E H, Zagalak B

出版信息

Eur J Biochem. 1978 Feb;83(2):437-51. doi: 10.1111/j.1432-1033.1978.tb12110.x.

Abstract
  1. Ethylmalonyl-CoA was found to be a substrate for methylmalonyl-CoA mutase from Propionibacterium shermanii, the product being mainly (2R)-methylsuccinyl-CoA along with some (2S)-diastereoisomer. 2. The relevant 1H-nuclear magnetic resonance signals of methylsuccinic acid and of its dimethyl ester were assigned to the diastereotopic methylene hydrogens using sterospecifically dideuterated specimens of known configuration. 3. [2(-2)H1]Ethylmalonyl-CoA was converted by methylmalonyl-CoA mutase in 2H2O mainly to (2R, 3S)-[3(-2)H1]methylsuccinyl-CoA. No dideuterated product was observed. 4. Starting from (1R)-[1(-2)H1]-ethathanol, (1S)-[1(-2)H1]ethanol and [2H6] ethanol the following deuterated specimens of ethylmalonic acid were synthesised and characterised: (3S)-[3(-2)H1], (3R)-[3(-2)H1] and [3(-2)H2, 4(-2)H3], respectively. 5. Conversion of (3S)-[3(-2)H1]-ethylmalonyl-CoA (70% 2H1 and 2% 2H2 species) on the mutase in water afforded mainly (2R)-[2(-2)H1]methylsuccinyl-CoA along with some (2S)-diastereoisomer. No deuterium loss was observed. 6. Methylmalonyl-CoA mutase converted (3R)-[3(-2)H1]ethylmalonyl-CoA (81% 2H1 and 2% 2H2 species) to the following methylsuccinyl-CoA species: 33% [3(-2)H1], the deuterium being in the threo position with respect to the methyl group; 21% [2(-2)H1]; 46% unlabelled. The ratio of the species with (2R) and (2S) configuration was about 60:40. 7. Reaction of [3(-2)H2, 4(-2)H3]ethylmalonyl-CoA (94.5% [2H5] species) with the mutase gave the following labelled methylsuccinyl-CoA species:53.4% [methyl-2H3, 2(-2)H1, 3(-2)H1], the 3-deuterium being in the threo position with respect to the methyl group; 37.6% [methyl-2H3, 2(-2)H1]; 5% [methyl(-2)H3, 2(-2)H1, 2(-2)H1, 3(-2)H1] the 3-deuterium being in erythro position with respect to the methyl group; 4% [methyl(-2)H3, 3(-2)H1]. The ratio of the species with (2R) and (2S) configuration was about 70:30. 8. Implications of these findings for the mechanism of the rearrangements catalysed by coenzyme B12 are discussed.
摘要
  1. 发现乙基丙二酰辅酶A是谢氏丙酸杆菌甲基丙二酰辅酶A变位酶的一种底物,产物主要是(2R)-甲基琥珀酰辅酶A以及一些(2S)-非对映异构体。

  2. 利用已知构型的立体特异性双氘代样品,将甲基琥珀酸及其二甲酯的相关1H-核磁共振信号归属于非对映异位亚甲基氢。

  3. [2(-2)H1]乙基丙二酰辅酶A在2H2O中被甲基丙二酰辅酶A变位酶主要转化为(2R, 3S)-[3(-2)H1]甲基琥珀酰辅酶A。未观察到双氘代产物。

  4. 从(1R)-[1(-2)H1]-乙醇、(1S)-[1(-2)H1]乙醇和[2H6]乙醇出发,合成并表征了以下氘代乙基丙二酸样品:(3S)-[3(-2)H1]、(3R)-[3(-2)H1]和[3(-2)H2, 4(-2)H3]。

  5. (3S)-[3(-2)H1]-乙基丙二酰辅酶A(70% 2H1和2% 2H2种类)在水中经变位酶作用主要生成(2R)-[2(-2)H1]甲基琥珀酰辅酶A以及一些(2S)-非对映异构体。未观察到氘损失。

  6. 甲基丙二酰辅酶A变位酶将(3R)-[3(-2)H1]乙基丙二酰辅酶A(81% 2H1和2% 2H2种类)转化为以下甲基琥珀酰辅酶A种类:33% [3(-2)H1],氘相对于甲基处于苏式位置;21% [2(-2)H1];46%未标记。(2R)和(2S)构型种类的比例约为60:40。

  7. [3(-2)H2, 4(-2)H3]乙基丙二酰辅酶A(94.5% [2H5]种类)与变位酶反应生成以下标记的甲基琥珀酰辅酶A种类:53.4% [甲基-2H3, 2(-2)H1, 3(-2)H1],3-氘相对于甲基处于苏式位置;37.6% [甲基-2H3, 2(-2)H1];5% [甲基(-2)H3, 2(-2)H1, 2(-2)H1, 3(-2)H1],3-氘相对于甲基处于赤式位置;4% [甲基(-2)H3, 3(-2)H1]。(2R)和(2S)构型种类的比例约为70:30。

  8. 讨论了这些发现对辅酶B12催化重排机制的意义。

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