Centre de Recerca en Sanitat Animal (CReSA), UAB-IRTA, Campus de la Universitat Autònoma de Barcelona, Bellaterra, 08193 Barcelona, Spain.
Centre de Recerca en Sanitat Animal (CReSA), UAB-IRTA, Campus de la Universitat Autònoma de Barcelona, Bellaterra, 08193 Barcelona, Spain ; Departament de Sanitat i Anatomia Animals, Universitat Autònoma de Barcelona, Bellaterra, 08193 Barcelona, Spain.
Biomed Res Int. 2014;2014:269402. doi: 10.1155/2014/269402. Epub 2014 Jan 19.
This study aimed to provide novel insights into the gastrointestinal microbial diversity from different gastrointestinal locations in weaning piglets using PCR-restriction fragment length polymorphism (PCR-RFLP). Additionally, the effect of different feed additives was analyzed. Thirty-two piglets were fed with four different diets: a control group and three enriched diets, with avilamycin, sodium butyrate, and a plant extract mixture. Digesta samples were collected from eight different gastrointestinal segments of each animal and the bacterial population was analysed by a PCR-RFLP technique that uses 16S rDNA gene sequences. Bacterial diversity was assessed by calculating the number of bands and the Shannon-Weaver index. Dendrograms were constructed to estimate the similarity of bacterial populations. A higher bacterial diversity was detected in large intestine compared to small intestine. Among diets, the most relevant microbial diversity differences were found between sodium butyrate and plant extract mixture. Proximal jejunum, ileum, and proximal colon were identified as those segments that could be representative of microbial diversity in pig gut. Results indicate that PCR-RFLP technique allowed detecting modifications on the gastrointestinal microbial ecology in pigs fed with different additives, such as increased biodiversity by sodium butyrate in feed.
本研究旨在通过聚合酶链式反应-限制性片段长度多态性(PCR-RFLP),从断奶仔猪不同的胃肠道部位提供胃肠道微生物多样性的新见解。此外,还分析了不同饲料添加剂的影响。32 头仔猪分别用四种不同的日粮喂养:对照组和三种富集日粮,分别添加了阿维拉霉素、丁酸钠和植物提取物混合物。从每个动物的八个不同胃肠道部位采集消化物样本,并通过 PCR-RFLP 技术分析细菌种群,该技术使用 16S rDNA 基因序列。通过计算带数和香农-威弗指数评估细菌多样性。构建了聚类树状图来估计细菌种群的相似性。与小肠相比,大肠中检测到的细菌多样性更高。在日粮中,在丁酸钠和植物提取物混合物之间发现了最相关的微生物多样性差异。空肠、回肠和近端结肠被确定为能够代表猪肠道微生物多样性的代表性部位。结果表明,PCR-RFLP 技术能够检测到不同添加剂喂养的猪胃肠道微生物生态的变化,例如丁酸钠在饲料中增加了生物多样性。