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真核细胞中的去腺苷酸化及其调控

Deadenylation and its regulation in eukaryotic cells.

作者信息

Zhang Xiaokan, Kleiman Frida E, Devany Emral

机构信息

Department of Chemistry, Hunter College and Graduate Center, City University of New York, 10065, New York, NY, USA.

出版信息

Methods Mol Biol. 2014;1125:289-96. doi: 10.1007/978-1-62703-971-0_23.

DOI:10.1007/978-1-62703-971-0_23
PMID:24590797
Abstract

Messenger RNA deadenylation is a process that allows rapid regulation of gene expression in response to different cellular conditions. The change of the mRNA poly(A) tail length by the activation of deadenylation might regulate gene expression by affecting mRNA stability, mRNA transport, or translation initiation. Activation of deadenylation processes are highly regulated and associated with different cellular conditions such as cancer, development, mRNA surveillance, DNA damage response, and cell differentiation. In the last few years, new technologies for studying deadenylation have been developed. Here we overview concepts related to deadenylation and its regulation in eukaryotic cells. We also describe some of the most commonly used protocols to study deadenylation in eukaryotic cells.

摘要

信使核糖核酸(mRNA)去腺苷酸化是一个能够根据不同细胞状况快速调节基因表达的过程。通过激活去腺苷酸化来改变mRNA的聚腺苷酸(poly(A))尾长度,可能会通过影响mRNA稳定性、mRNA转运或翻译起始来调节基因表达。去腺苷酸化过程的激活受到高度调控,并与不同的细胞状况相关,如癌症、发育、mRNA监测、DNA损伤反应和细胞分化。在过去几年中,已经开发出了用于研究去腺苷酸化的新技术。在此,我们概述了与真核细胞中去腺苷酸化及其调控相关的概念。我们还描述了一些研究真核细胞中去腺苷酸化最常用的实验方案。

相似文献

1
Deadenylation and its regulation in eukaryotic cells.真核细胞中的去腺苷酸化及其调控
Methods Mol Biol. 2014;1125:289-96. doi: 10.1007/978-1-62703-971-0_23.
2
To polyadenylate or to deadenylate: that is the question.多聚腺苷酸化还是去腺苷酸化:这是个问题。
Cell Cycle. 2010 Nov 15;9(22):4437-49. doi: 10.4161/cc.9.22.13887.
3
Analysis of mRNA deadenylation by multi-protein complexes.多蛋白复合物的 mRNA 去腺苷酸化分析。
Methods. 2017 Aug 15;126:95-104. doi: 10.1016/j.ymeth.2017.06.009. Epub 2017 Jun 13.
4
Messenger RNA turnover in eukaryotes: pathways and enzymes.真核生物中的信使核糖核酸周转:途径与酶
Crit Rev Biochem Mol Biol. 2004 Jul-Aug;39(4):197-216. doi: 10.1080/10409230490513991.
5
Regulated deadenylation in vitro.体外调控的去腺苷酸化
Methods Enzymol. 2008;448:77-106. doi: 10.1016/S0076-6879(08)02605-0.
6
Exonucleases and endonucleases involved in polyadenylation-assisted RNA decay.参与多聚腺苷酸化辅助 RNA 降解的核酸外切酶和核酸内切酶。
Wiley Interdiscip Rev RNA. 2011 Jan-Feb;2(1):106-23. doi: 10.1002/wrna.45. Epub 2010 Sep 15.
7
Control of poly(A) tail length.聚腺苷酸尾长度的控制。
Wiley Interdiscip Rev RNA. 2011 May-Jun;2(3):348-61. doi: 10.1002/wrna.56. Epub 2010 Nov 17.
8
Assaying mRNA deadenylation in vivo.体内mRNA去腺苷酸化分析。
Methods Mol Biol. 2014;1125:313-24. doi: 10.1007/978-1-62703-971-0_25.
9
Diverse functions of deadenylases in DNA damage response and genomic integrity.去腺苷酶在 DNA 损伤应答和基因组完整性中的多种功能。
Wiley Interdiscip Rev RNA. 2021 May;12(3):e1621. doi: 10.1002/wrna.1621. Epub 2020 Aug 13.
10
mRNA stability and control of cell proliferation.mRNA 的稳定性和细胞增殖的控制。
Biochem Soc Trans. 2011 Oct;39(5):1461-5. doi: 10.1042/BST0391461.

引用本文的文献

1
Poly(A) tail dynamics: Measuring polyadenylation, deadenylation and poly(A) tail length.聚腺苷酸(Poly(A))尾动态变化:测量聚腺苷酸化、去腺苷酸化及聚腺苷酸(Poly(A))尾长度
Methods Enzymol. 2021;655:265-290. doi: 10.1016/bs.mie.2021.04.005. Epub 2021 May 3.
2
Connections between 3' end processing and DNA damage response: Ten years later.3' 端加工与DNA损伤反应之间的联系:十年之后
Wiley Interdiscip Rev RNA. 2020 Mar;11(2):e1571. doi: 10.1002/wrna.1571. Epub 2019 Oct 28.
3
RNA binding protein Caprin-2 is a pivotal regulator of the central osmotic defense response.
RNA结合蛋白Caprin-2是中枢渗透压防御反应的关键调节因子。
Elife. 2015 Nov 12;4:e09656. doi: 10.7554/eLife.09656.