Jung Sook, Main Dorrie
Department of Horticulture, Washington State University, Pullman, WA 99164 USA.
Plant Biotechnol Rep. 2014;8(2):49-64. doi: 10.1007/s11816-013-0282-3. Epub 2013 May 21.
Recent technological advances in biology promise unprecedented opportunities for rapid and sustainable advancement of crop quality. Following this trend, the Rosaceae research community continues to generate large amounts of genomic, genetic and breeding data. These include annotated whole genome sequences, transcriptome and expression data, proteomic and metabolomic data, genotypic and phenotypic data, and genetic and physical maps. Analysis, storage, integration and dissemination of these data using bioinformatics tools and databases are essential to provide utility of the data for basic, translational and applied research. This review discusses the currently available genomics and bioinformatics resources for the Rosaceae family.
生物学领域最近的技术进步为作物品质的快速和可持续提升带来了前所未有的机遇。顺应这一趋势，蔷薇科研究群体持续产生大量的基因组、遗传和育种数据。这些数据包括注释的全基因组序列、转录组和表达数据、蛋白质组和代谢组数据、基因型和表型数据，以及遗传图谱和物理图谱。利用生物信息学工具和数据库对这些数据进行分析、存储、整合和传播，对于将数据应用于基础研究、转化研究和应用研究至关重要。本综述讨论了目前可用于蔷薇科的基因组学和生物信息学资源。
