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采用定量蛋白质组学技术鉴定前原蛋白和转谷氨酰胺酶为胆囊癌潜在的生物标志物。

Identification of prosaposin and transgelin as potential biomarkers for gallbladder cancer using quantitative proteomics.

机构信息

Institute of Bioinformatics, International Technology Park, Bangalore 560066, India.

Centre for Genomics, Molecular and Human Genetics, Jiwaji University, Gwalior 474011, India; School of Studies in Zoology, Jiwaji University, Gwalior, India.

出版信息

Biochem Biophys Res Commun. 2014 Apr 18;446(4):863-9. doi: 10.1016/j.bbrc.2014.03.017. Epub 2014 Mar 20.

Abstract

Gallbladder cancer is an uncommon but lethal malignancy with particularly high incidence in Chile, India, Japan and China. There is a paucity of unbiased large-scale studies investigating molecular basis of gallbladder cancer. To systematically identify differentially regulated proteins in gallbladder cancer, iTRAQ-based quantitative proteomics of gallbladder cancer was carried out using Fourier transform high resolution mass spectrometry. Of the 2575 proteins identified, proteins upregulated in gallbladder cancer included several lysosomal proteins such as prosaposin, cathepsin Z and cathepsin H. Downregulated proteins included serine protease HTRA1 and transgelin, which have been reported to be downregulated in several other cancers. Novel biomarker candidates including prosaposin and transgelin were validated to be upregulated and downregulated, respectively, in gallbladder cancer using tissue microarrays. Our study provides the first large scale proteomic characterization of gallbladder cancer which will serve as a resource for future discovery of biomarkers for gallbladder cancer.

摘要

胆囊癌是一种罕见但致命的恶性肿瘤,在智利、印度、日本和中国的发病率特别高。目前,关于胆囊癌分子基础的大规模、无偏倚研究还很少。为了系统地鉴定胆囊癌中差异调节的蛋白质,我们使用傅里叶变换高分辨率质谱对胆囊癌进行了 iTRAQ 基于定量蛋白质组学的研究。在鉴定的 2575 种蛋白质中,胆囊癌中上调的蛋白质包括几种溶酶体蛋白,如前蛋白、组织蛋白酶 Z 和组织蛋白酶 H。下调的蛋白质包括丝氨酸蛋白酶 HTRA1 和转胶蛋白,它们在其他几种癌症中也被报道下调。使用组织微阵列验证了包括前蛋白和转胶蛋白在内的新型生物标志物候选物分别在胆囊癌中上调和下调。本研究首次对胆囊癌进行了大规模的蛋白质组学特征描述,将为胆囊癌生物标志物的未来发现提供资源。

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