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本文引用的文献

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In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features.在体全基因组 RNA 二级结构谱分析揭示新的调控特征。
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Effect of natural genetic variation on enhancer selection and function.自然遗传变异对增强子选择和功能的影响。
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Hidden specificity in an apparently nonspecific RNA-binding protein.在一种明显非特异性的 RNA 结合蛋白中隐藏的特异性。
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eRNAs promote transcription by establishing chromatin accessibility at defined genomic loci.增强子 RNA 通过在特定基因组位置建立染色质可及性来促进转录。
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lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs.lncRNA 依赖的雄激素受体调控基因激活程序的机制。
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Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription.在巨噬细胞激活过程中,增强子景观的重塑与增强子转录相偶联。
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Tandem stem-loops in roX RNAs act together to mediate X chromosome dosage compensation in Drosophila.串联茎环结构在 roX RNAs 中共同作用,以介导果蝇 X 染色体剂量补偿。
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Alu elements in ANRIL non-coding RNA at chromosome 9p21 modulate atherogenic cell functions through trans-regulation of gene networks.9p21 染色体上 ANRIL 非编码 RNA 中的 Alu 元件通过对基因网络的反式调控调节动脉粥样硬化细胞的功能。
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增强子RNA与调控转录程序

Enhancer RNAs and regulated transcriptional programs.

作者信息

Lam Michael T Y, Li Wenbo, Rosenfeld Michael G, Glass Christopher K

机构信息

Department of Cellular and Molecular Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, USA.

Howard Hughes Medical Institute, Department of Medicine, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, USA.

出版信息

Trends Biochem Sci. 2014 Apr;39(4):170-82. doi: 10.1016/j.tibs.2014.02.007. Epub 2014 Mar 24.

DOI:10.1016/j.tibs.2014.02.007
PMID:24674738
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4266492/
Abstract

A large portion of the human genome is transcribed into RNAs without known protein-coding functions, far outnumbering coding transcription units. Extensive studies of long noncoding RNAs (lncRNAs) have clearly demonstrated that they can play critical roles in regulating gene expression, development, and diseases, acting both as transcriptional activators and repressors. More recently, enhancers have been found to be broadly transcribed, resulting in the production of enhancer-derived RNAs, or eRNAs. Here, we review emerging evidence suggesting that at least some eRNAs contribute to enhancer function. We discuss these findings with respect to potential mechanisms of action of eRNAs and other ncRNAs in regulated gene expression.

摘要

人类基因组的很大一部分被转录为没有已知蛋白质编码功能的RNA,其数量远远超过编码转录单元。对长链非编码RNA(lncRNA)的广泛研究清楚地表明,它们在调节基因表达、发育和疾病中可以发挥关键作用,既可以作为转录激活因子,也可以作为转录抑制因子。最近,人们发现增强子被广泛转录,从而产生增强子衍生RNA,即eRNA。在这里,我们综述了新出现的证据,表明至少一些eRNA有助于增强子功能。我们结合eRNA和其他非编码RNA在调控基因表达中的潜在作用机制来讨论这些发现。