Martinez Manuel
Centro de Biotecnología y Genómica de Plantas (UPM-INIA), Campus Montegancedo, Universidad Politécnica de Madrid, Autovía M40 (Km 38), 28223-Pozuelo de Alarcón, Madrid, Spain.
Comput Struct Biotechnol J. 2013 Aug 14;8:e201307001. doi: 10.5936/csbj.201307001. eCollection 2013.
The development of new high-throughput sequencing technologies has increased dramatically the number of successful genomic projects. Thus, draft genomic sequences of more than 60 plant species are currently available. Suitable bioinformatics tools are being developed to assemble, annotate and analyze the enormous number of sequences produced. In this context, specific plant comparative genomic databases are become powerful tools for gene family annotation in plant clades. In this mini-review, the current state-of-art of genomic projects is glossed. Besides, the computational tools developed to compare genomic data are compiled.
新的高通量测序技术的发展极大地增加了成功的基因组项目的数量。因此,目前已有60多种植物物种的基因组草图序列。人们正在开发合适的生物信息学工具来组装、注释和分析所产生的大量序列。在这种背景下,特定的植物比较基因组数据库正成为植物进化枝中基因家族注释的强大工具。在这篇小型综述中,概述了基因组项目的当前技术水平。此外,还汇编了用于比较基因组数据的计算工具。