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检测分类不当的葡萄品种中的新遗传特征和等位基因变异。

Detection of new genetic profiles and allelic variants in improperly classified grapevine accessions.

机构信息

a Department of Biology, University of Rome "Tor Vergata", via della Ricerca Scientifica 1, Rome 00133, Italy.

出版信息

Genome. 2014 Feb;57(2):111-8. doi: 10.1139/gen-2013-0218. Epub 2014 Mar 11.

Abstract

Thirty-seven grapevine accessions, collected in Central Italy, were characterized by morphological and genetic analysis, according to guidelines developed by European Union programs of grapevine research and standardization. Traditional denominations of some sampled varieties were revealed to be incorrect; moreover, 10 synonymies and 12 homonymies were recognized. Ampelographic and ampelometric measurements of leaf characters were performed. These data generated a phenotypic similarity matrix and a relative diagram showing morphological differences between specimens. Many samples presented different morphology even in the presence of the same genotype, probably as a result of various environmental pressures. Grapevines were typed by 12 microsatellite loci and then compared with the CRA-VIT genetic resource database. Twenty-five SSR profiles were clearly identified as well-known cultivars, while nine genotypes did not find a direct correspondence: these samples could represent putative new autochthonous Latial Vitis vinifera cultivars or hybrid varieties. The genetic approach also detected three new (169 and 173 in VVMD27 locus; 179 in ISV2 locus) and seven rare allelic variants. Plant sample classification by oral history, morphological observations, and molecular results were compared and discussed. Scions of samples were planted in the Botanic Garden of the University of Rome "Tor Vergata", to preserve grapevine biodiversity and to protect possible new autochthonous varieties.

摘要

根据欧盟葡萄研究和标准化计划制定的指导方针,对来自意大利中部的 37 个葡萄品种进行了形态学和遗传学分析。一些采样品种的传统名称被证明是不正确的;此外,还发现了 10 个同义词和 12 个同形异义词。对叶片特征进行了葡萄图谱学和葡萄图谱测量。这些数据生成了一个表型相似性矩阵和一个相对图,显示了标本之间的形态差异。许多样本即使具有相同的基因型也表现出不同的形态,这可能是由于各种环境压力造成的。对 12 个微卫星基因座对葡萄进行了分型,然后与 CRA-VIT 遗传资源数据库进行了比较。25 个 SSR 图谱被明确鉴定为知名品种,而 9 个基因型没有直接对应:这些样本可能代表潜在的新的本土拉蒂亚葡萄品种或杂交品种。遗传方法还检测到三个新的(VVMD27 基因座的 169 和 173;ISV2 基因座的 179)和七个稀有等位基因变异。通过口头历史、形态观察和分子结果对植物样本进行分类,并对结果进行了比较和讨论。将样本的接穗种植在罗马“Tor Vergata”大学植物园中,以保护葡萄生物多样性并保护可能的新本土品种。

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