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用于检测血管性血友病携带者的种系新发突变和连锁标记物与DNA测序的比较

Germline de novo mutations and linkage markers vs. DNA sequencing for carrier detection in von Willebrand disease.

作者信息

Ahmad F, Oyen F, Jan R, Budde U, Schneppenheim R, Saxena R

机构信息

Department of Haematology, All India Institute of Medical Sciences (AIIMS), New Delhi, India; Center for Translational Medicine, School of Medicine Temple University, Philadelphia, PA, USA.

出版信息

Haemophilia. 2014 Jul;20(4):e311-7. doi: 10.1111/hae.12441. Epub 2014 Apr 8.

Abstract

Linkage analysis in autosomal inherited von Willebrand disease (VWD) is important to diagnose the carriers and reduce the burden of severe type VWD. The study was designed to identify the carriers and estimate the frequency of variable number of tandem repeats (VNTR) instability in VWD families. Carrier detection was performed in eight recessive type 3 VWD (VWD3) families using VNTRs VWF1 and VWF2, RsaI (789Thr/Ala) linkage markers, multimer analysis and DNA sequencing. Moreover, five dominant VWD families were studied through DNA sequencing and multimer analysis. Frequency of VWF VNTR instability was investigated in 20 VWD families. In VWD3 families, a total of 22 (81.5%) carriers were identified using VWF1 and VWF2 markers. However, only 13(48.1%) carriers were identified through RsaI markers. Mutation screening revealed 22(81.5%) carriers in VWD3 and 4 (33.3%) carriers in VWD2 families. In comparison to DNA sequencing, the accuracy of VWF1 and VWF2 markers in VWD3 was 85.7% while RsaI could identify 68.2% carriers accurately. Mutations p.R1205H and p.C1272R were identified as de novo in families. Multimer analysis confirmed the identified carriers in VWD2 families. Three VWD families were found to be carrying VNTR instability for VWF1 and VWF2 locus. VNTRs could be an effective linkage markers for carrier detection in VWD3 families. However, in the event of germline de novo mutations and VNTR instability, it may confound risk of misdiagnosis of carriers. Multimer analysis could be an alternative way of carrier detection in dominant type 2A and type 2B VWD families.

摘要

常染色体遗传性血管性血友病(VWD)的连锁分析对于诊断携带者和减轻重型VWD的负担非常重要。本研究旨在识别VWD家族中的携带者,并估计可变串联重复序列(VNTR)不稳定性的频率。使用VNTRs VWF1和VWF2、RsaI(789Thr/Ala)连锁标记、多聚体分析和DNA测序,对8个隐性3型VWD(VWD3)家族进行携带者检测。此外,通过DNA测序和多聚体分析对5个显性VWD家族进行了研究。在20个VWD家族中研究了VWF VNTR不稳定性的频率。在VWD3家族中,使用VWF1和VWF2标记共鉴定出22名(81.5%)携带者。然而,通过RsaI标记仅鉴定出13名(48.1%)携带者。突变筛查在VWD3家族中发现了22名(81.5%)携带者,在VWD2家族中发现了4名(33.3%)携带者。与DNA测序相比,VWD3中VWF1和VWF2标记的准确率为85.7%,而RsaI能准确鉴定68.2%的携带者。在家族中发现p.R1205H和p.C1272R突变为新发突变。多聚体分析证实了VWD2家族中已鉴定的携带者。发现3个VWD家族的VWF1和VWF2位点存在VNTR不稳定性。VNTRs可能是VWD3家族中检测携带者的有效连锁标记。然而,在发生种系新发突变和VNTR不稳定性的情况下,可能会混淆携带者的误诊风险。多聚体分析可能是显性2A型和2B型VWD家族中检测携带者的另一种方法。

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