Wu Jiang, Fan Yongqiang, Ling Jiqiang
Department of Microbiology and Molecular Genetics, Medical School, University of Texas Health Science Center, Houston, TX 77030, USA.
Department of Microbiology and Molecular Genetics, Medical School, University of Texas Health Science Center, Houston, TX 77030, USA Graduate School of Biomedical Sciences, University of Texas, Houston, TX 77030, USA
Nucleic Acids Res. 2014 Jun;42(10):6523-31. doi: 10.1093/nar/gku271. Epub 2014 Apr 17.
Aminoacyl-tRNA synthetases maintain the fidelity during protein synthesis by selective activation of cognate amino acids at the aminoacylation site and hydrolysis of misformed aminoacyl-tRNAs at the editing site. Threonyl-tRNA synthetase (ThrRS) misactivates serine and utilizes an editing site cysteine (C182 in Escherichia coli) to hydrolyze Ser-tRNA(Thr). Hydrogen peroxide oxidizes C182, leading to Ser-tRNA(Thr) production and mistranslation of threonine codons as serine. The mechanism of C182 oxidation remains unclear. Here we used a chemical probe to demonstrate that C182 was oxidized to sulfenic acid by air, hydrogen peroxide and hypochlorite. Aminoacylation experiments in vitro showed that air oxidation increased the Ser-tRNA(Thr) level in the presence of elongation factor Tu. C182 forms a putative metal binding site with three conserved histidine residues (H73, H77 and H186). We showed that H73 and H186, but not H77, were critical for activating C182 for oxidation. Addition of zinc or nickel ions inhibited C182 oxidation by hydrogen peroxide. These results led us to propose a model for C182 oxidation, which could serve as a paradigm for the poorly understood activation mechanisms of protein cysteine residues. Our work also suggests that bacteria may use ThrRS editing to sense the oxidant levels in the environment.
氨酰 - tRNA合成酶通过在氨酰化位点选择性激活同源氨基酸以及在编辑位点水解错误形成的氨酰 - tRNA来维持蛋白质合成过程中的保真度。苏氨酰 - tRNA合成酶(ThrRS)会错误激活丝氨酸,并利用编辑位点的半胱氨酸(大肠杆菌中的C182)水解丝氨酰 - tRNA(Thr)。过氧化氢会氧化C182,导致丝氨酰 - tRNA(Thr)的产生以及苏氨酸密码子错译为丝氨酸。C182氧化的机制仍不清楚。在此,我们使用一种化学探针证明C182可被空气、过氧化氢和次氯酸盐氧化为亚磺酸。体外氨酰化实验表明,在延伸因子Tu存在的情况下空气氧化会增加丝氨酰 - tRNA(Thr)水平。C182与三个保守的组氨酸残基(H73、H77和H186)形成一个假定的金属结合位点。我们发现H73和H186而非H77对于激活C182进行氧化至关重要。添加锌离子或镍离子会抑制过氧化氢对C182的氧化。这些结果使我们提出了一个C182氧化模型,该模型可作为对了解甚少的蛋白质半胱氨酸残基激活机制的范例。我们的工作还表明细菌可能利用ThrRS编辑来感知环境中的氧化剂水平。