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Draft Genome Sequence of Lysobacter capsici AZ78, a Bacterium Antagonistic to Plant-Pathogenic Oomycetes.辣椒溶杆菌AZ78的基因组序列草图,一种对植物病原卵菌具有拮抗作用的细菌
Genome Announc. 2014 Apr 24;2(2):e00325-14. doi: 10.1128/genomeA.00325-14.
2
Lysobacter capsici AZ78 produces cyclo(L-Pro-L-Tyr), a 2,5-diketopiperazine with toxic activity against sporangia of Phytophthora infestans and Plasmopara viticola.辣椒溶杆菌AZ78产生环(L-脯氨酸-L-酪氨酸),一种对致病疫霉和葡萄生单轴霉的孢子囊具有毒活性的2,5-二酮哌嗪。
J Appl Microbiol. 2014 Oct;117(4):1168-80. doi: 10.1111/jam.12611. Epub 2014 Aug 21.
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Lysobacter capsici AZ78 can be combined with copper to effectively control Plasmopara viticola on grapevine.辣椒溶杆菌AZ78可与铜结合,有效防治葡萄霜霉病。
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Dual RNA-Seq of Lysobacter capsici AZ78 - Phytophthora infestans interaction shows the implementation of attack strategies by the bacterium and unsuccessful oomycete defense responses.辣椒溶杆菌AZ78与致病疫霉相互作用的双重RNA测序显示了细菌攻击策略的实施以及卵菌防御反应的失败。
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Characterisation of the Antibiotic Profile of AZ78, an Effective Biological Control Agent of Plant Pathogenic Microorganisms.植物病原微生物有效生物防治剂AZ78的抗生素特性分析
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Monitoring Lysobacter capsici AZ78 using strain specific qPCR reveals the importance of the formulation for its survival in vineyards.使用菌株特异性定量聚合酶链反应监测辣椒溶杆菌AZ78揭示了制剂对其在葡萄园存活的重要性。
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Isolation of 2,5-diketopiperazines from AZ78 with activity against .从具有抗……活性的AZ78中分离2,5-二酮哌嗪。 (由于原文中“against”后面内容缺失,翻译可能不太完整准确)
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Stepwise flow diagram for the development of formulations of non spore-forming bacteria against foliar pathogens: The case of Lysobacter capsici AZ78.针对叶部病原菌的非芽孢形成细菌制剂开发的逐步流程图:以辣椒溶杆菌AZ78为例。
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Diversity, Phylogeny and Plant Growth Promotion Traits of Nodule Associated Bacteria Isolated from .从……分离的根瘤相关细菌的多样性、系统发育及植物促生特性
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The Lysobacter capsici AZ78 Genome Has a Gene Pool Enabling it to Interact Successfully with Phytopathogenic Microorganisms and Environmental Factors.辣椒溶杆菌AZ78基因组拥有一个基因库,使其能够与植物病原微生物和环境因子成功相互作用。
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Comparative genomics and metabolic profiling of the genus Lysobacter.溶杆菌属的比较基因组学与代谢谱分析
BMC Genomics. 2015 Nov 23;16:991. doi: 10.1186/s12864-015-2191-z.
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Genomic information of the arsenic-resistant bacterium Lysobacter arseniciresistens type strain ZS79(T) and comparison of Lysobacter draft genomes.抗砷细菌抗砷溶杆菌模式菌株ZS79(T)的基因组信息及溶杆菌草图基因组比较
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Draft Genome Sequence of the Bacterium Lysobacter capsici X2-3, with a Broad Spectrum of Antimicrobial Activity against Multiple Plant-Pathogenic Microbes.具有对多种植物病原微生物广谱抗菌活性的辣椒溶杆菌X2-3的基因组序列草图
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Draft Genome Sequence of Antagonistic Agent Lysobacter antibioticus 13-6.拮抗细菌溶杆菌13-6的基因组序列草图
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本文引用的文献

1
Prokka: rapid prokaryotic genome annotation.Prokka:快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
2
Lysobacter capsici AZ78 can be combined with copper to effectively control Plasmopara viticola on grapevine.辣椒溶杆菌AZ78可与铜结合,有效防治葡萄霜霉病。
Microbiol Res. 2014 Jul-Aug;169(7-8):633-42. doi: 10.1016/j.micres.2013.09.013. Epub 2013 Sep 27.
3
An integrated pipeline for de novo assembly of microbial genomes.用于从头组装微生物基因组的集成管道。
PLoS One. 2012;7(9):e42304. doi: 10.1371/journal.pone.0042304. Epub 2012 Sep 13.
4
Genotypic and phenotypic variation among Lysobacter capsici strains isolated from Rhizoctonia suppressive soils.从根围抑病土壤中分离的辣椒丝杆菌菌株的基因型和表型变异。
Syst Appl Microbiol. 2010 Jun;33(4):232-5. doi: 10.1016/j.syapm.2010.03.002. Epub 2010 Apr 15.
5
Stenotrophomonas and Lysobacter: ubiquitous plant-associated gamma-proteobacteria of developing significance in applied microbiology.寡养单胞菌属和盐杆菌属:在应用微生物学中具有重要发展意义的普遍存在于植物相关的γ-变形菌。
J Appl Microbiol. 2010 Mar;108(3):756-770. doi: 10.1111/j.1365-2672.2009.04471.x. Epub 2009 Jul 13.
6
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.
7
Lysobacter capsici sp. nov., with antimicrobial activity, isolated from the rhizosphere of pepper, and emended description of the genus Lysobacter.辣椒溶杆菌新种,具有抗菌活性,从辣椒根际分离得到,以及溶杆菌属的修订描述
Int J Syst Evol Microbiol. 2008 Feb;58(Pt 2):387-92. doi: 10.1099/ijs.0.65290-0.
8
GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.GeneMarkS:一种用于预测微生物基因组中基因起始位点的自训练方法。对在调控区域中寻找序列基序的启示。
Nucleic Acids Res. 2001 Jun 15;29(12):2607-18. doi: 10.1093/nar/29.12.2607.

辣椒溶杆菌AZ78的基因组序列草图,一种对植物病原卵菌具有拮抗作用的细菌

Draft Genome Sequence of Lysobacter capsici AZ78, a Bacterium Antagonistic to Plant-Pathogenic Oomycetes.

作者信息

Puopolo Gerardo, Sonego Paolo, Engelen Kristof, Pertot Ilaria

机构信息

Department of Sustainable Agro-Ecosystems and Bioresources, Research and Innovation Centre, Fondazione Edmund Mach (FEM), San Michele all'Adige, Italy.

出版信息

Genome Announc. 2014 Apr 24;2(2):e00325-14. doi: 10.1128/genomeA.00325-14.

DOI:10.1128/genomeA.00325-14
PMID:24762937
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3999494/
Abstract

Lysobacter capsici AZ78, isolated from tobacco rhizosphere, effectively controls Phytophthora infestans and Plasmopara viticola on tomato and grapevine plants, respectively. We report the first draft genome sequence of the L. capsici species.

摘要

从烟草根际分离得到的辣椒溶杆菌AZ78,分别对番茄植株上的致病疫霉和葡萄植株上的葡萄生单轴霉具有有效的防治作用。我们报道了辣椒溶杆菌种的首个基因组草图序列。