• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

傅里叶变换红外检测光氧化酪氨酸 YZ 和光系统 II 中偶联组氨酸之间捕获的可极化质子:与水氧化质子转移机制的相关性。

Fourier transform infrared detection of a polarizable proton trapped between photooxidized tyrosine YZ and a coupled histidine in photosystem II: relevance to the proton transfer mechanism of water oxidation.

机构信息

Division of Material Science, Graduate School of Science, Nagoya University , Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan.

出版信息

Biochemistry. 2014 May 20;53(19):3131-44. doi: 10.1021/bi500237y. Epub 2014 May 7.

DOI:10.1021/bi500237y
PMID:24786306
Abstract

The redox-active tyrosine YZ (D1-Tyr161) in photosystem II (PSII) functions as an immediate electron acceptor of the Mn4Ca cluster, which is the catalytic center of photosynthetic water oxidation. YZ is also located in the hydrogen bond network that connects the Mn4Ca cluster to the lumen and hence is possibly related to the proton transfer process during water oxidation. To understand the role of YZ in the water oxidation mechanism, we have studied the hydrogen bonding interactions of YZ and its photooxidized neutral radical YZ(•) together with the interaction of the coupled His residue, D1-His190, using light-induced Fourier transform infrared (FTIR) difference spectroscopy. The YZ(•)-minus-YZ FTIR difference spectrum of Mn-depleted PSII core complexes exhibited a broad positive feature around 2800 cm(-1), which was absent in the corresponding spectrum of another redox-active tyrosine YD (D2-Tyr160). Analyses by (15)N and H/D substitutions, examination of the pH dependence, and density functional theory and quantum mechanics/molecular mechanics (QM/MM) calculations showed that this band arises from the N-H stretching vibration of the protonated cation of D1-His190 forming a charge-assisted strong hydrogen bond with YZ(•). This result provides strong evidence that the proton released from YZ upon its oxidation is trapped in D1-His190 and a positive charge remains on this His. The broad feature of the ~2800 cm(-1) band reflects a large proton polarizability in the hydrogen bond between YZ(•) and HisH(+). QM/MM calculations further showed that upon YZ oxidation the hydrogen bond network is rearranged and one water molecule moves toward D1-His190. From these data, a novel proton transfer mechanism via YZ(•)-HisH(+) is proposed, in which hopping of the polarizable proton of HisH(+) to this water triggers the transfer of the proton from substrate water to the luminal side. This proton transfer mechanism could be functional in the S2 → S3 transition, which requires proton release before electron transfer because of an excess positive charge on the Mn4Ca cluster.

摘要

在光合作用的水氧化过程中,光系统 II(PSII)中的氧化还原活性酪氨酸 YZ(D1-Tyr161)作为 Mn4Ca 簇的直接电子受体起作用,而 Mn4Ca 簇是光合作用水氧化的催化中心。YZ 还位于连接 Mn4Ca 簇与腔的氢键网络中,因此可能与水氧化过程中的质子转移过程有关。为了了解 YZ 在水氧化机制中的作用,我们使用光诱导傅里叶变换红外(FTIR)差谱法研究了 YZ 及其光氧化中性自由基 YZ(•)与偶联 His 残基 D1-His190 的氢键相互作用。Mn 耗尽 PSII 核心复合物的 YZ(•)-减去-YZ FTIR 差谱在 2800cm(-1)左右显示出一个宽的正特征峰,而另一个氧化还原活性酪氨酸 YD(D2-Tyr160)的相应光谱中则没有这个特征峰。通过 (15)N 和 H/D 取代分析、pH 值依赖性研究、密度泛函理论和量子力学/分子力学(QM/MM)计算表明,该带源于 D1-His190 的质子化阳离子的 N-H 伸缩振动,与 YZ(•)形成电荷辅助强氢键。这一结果提供了强有力的证据表明,YZ 氧化时释放的质子被捕获在 D1-His190 中,并且这个 His 上仍然存在正电荷。~2800cm(-1) 带的宽特征反映了 YZ(•)和 HisH(+)之间氢键中的质子极化率较大。QM/MM 计算进一步表明,YZ 氧化后,氢键网络发生重排,一个水分子向 D1-His190 移动。根据这些数据,提出了一种通过 YZ(•)-HisH(+)的新型质子转移机制,其中 HisH(+)的可极化质子的跳跃引发质子从底物水向腔侧的转移。这种质子转移机制可能在 S2→S3 跃迁中起作用,因为 Mn4Ca 簇上的正电荷过剩,所以在电子转移之前需要释放质子。

相似文献

1
Fourier transform infrared detection of a polarizable proton trapped between photooxidized tyrosine YZ and a coupled histidine in photosystem II: relevance to the proton transfer mechanism of water oxidation.傅里叶变换红外检测光氧化酪氨酸 YZ 和光系统 II 中偶联组氨酸之间捕获的可极化质子:与水氧化质子转移机制的相关性。
Biochemistry. 2014 May 20;53(19):3131-44. doi: 10.1021/bi500237y. Epub 2014 May 7.
2
Infrared Detection of a Proton Released from Tyrosine YD to the Bulk upon Its Photo-oxidation in Photosystem II.在光系统II中酪氨酸YD光氧化时从其释放到主体中的质子的红外检测。
Biochemistry. 2015 Aug 18;54(32):5045-53. doi: 10.1021/acs.biochem.5b00568. Epub 2015 Aug 7.
3
D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine Y for proton exit during water oxidation.光系统II中的D1-Asn-298参与了氧化还原活性酪氨酸Y附近的氢键网络,该网络在水氧化过程中用于质子输出。
J Biol Chem. 2017 Dec 8;292(49):20046-20057. doi: 10.1074/jbc.M117.815183. Epub 2017 Oct 18.
4
Role of a Water Network around the Mn4CaO5 Cluster in Photosynthetic Water Oxidation: A Fourier Transform Infrared Spectroscopy and Quantum Mechanics/Molecular Mechanics Calculation Study.锰钙氧簇周围水网络在光合水氧化中的作用:傅里叶变换红外光谱和量子力学/分子力学计算研究
Biochemistry. 2016 Jan 26;55(3):597-607. doi: 10.1021/acs.biochem.5b01120. Epub 2016 Jan 12.
5
Evidence from FTIR difference spectroscopy that D1-Asp61 influences the water reactions of the oxygen-evolving Mn4CaO5 cluster of photosystem II.傅里叶变换红外差谱证据表明 D1-Asp61 影响光合作用系统 II 中氧释放 Mn4CaO5 簇的水反应。
Biochemistry. 2014 May 13;53(18):2941-55. doi: 10.1021/bi500309f. Epub 2014 Apr 23.
6
Role of D1-His190 in proton-coupled electron transfer reactions in photosystem II: a chemical complementation study.D1-His190在光系统II质子耦合电子转移反应中的作用:一项化学互补研究。
Biochemistry. 1998 Aug 11;37(32):11352-65. doi: 10.1021/bi980510u.
7
Structural coupling between the oxygen-evolving Mn cluster and a tyrosine residue in photosystem II as revealed by Fourier transform infrared spectroscopy.傅里叶变换红外光谱揭示的光系统II中析氧锰簇与酪氨酸残基之间的结构耦合
Biochemistry. 1997 Dec 2;36(48):14705-11. doi: 10.1021/bi971760y.
8
Water molecules coupled to the redox-active tyrosine Y(D) in photosystem II as detected by FTIR spectroscopy.通过傅里叶变换红外光谱法检测到与光系统II中氧化还原活性酪氨酸Y(D)偶联的水分子。
Biochemistry. 2007 Dec 11;46(49):14245-9. doi: 10.1021/bi701752d. Epub 2007 Nov 13.
9
Proton-coupled electron-transfer processes in photosystem II probed by highly resolved g-anisotropy of redox-active tyrosine YZ.通过对氧化还原活性色氨酸 YZ 的高分辨 g 各向异性研究探测光合作用系统 II 中的质子偶联电子转移过程。
J Am Chem Soc. 2011 Mar 30;133(12):4655-60. doi: 10.1021/ja2000566. Epub 2011 Mar 7.
10
Calcium, Ammonia, Redox-Active Tyrosine YZ, and Proton-Coupled Electron Transfer in the Photosynthetic Oxygen-Evolving Complex.光合作用放氧复合体中的钙、氨、氧化还原活性酪氨酸YZ以及质子耦合电子转移
J Phys Chem B. 2017 Apr 27;121(16):3987-3996. doi: 10.1021/acs.jpcb.7b01802. Epub 2017 Apr 14.

引用本文的文献

1
Tracking the first electron transfer step at the donor side of oxygen-evolving photosystem II by time-resolved infrared spectroscopy.通过时间分辨红外光谱追踪光解水的光系统II供体侧的首个电子转移步骤。
Photosynth Res. 2024 Dec;162(2-3):353-369. doi: 10.1007/s11120-023-01057-3. Epub 2023 Nov 23.
2
D139N mutation of PsbP enhances the oxygen-evolving activity of photosystem II through stabilized binding of a chloride ion.PsbP的D139N突变通过稳定氯离子结合增强了光系统II的放氧活性。
PNAS Nexus. 2022 Jul 23;1(3):pgac136. doi: 10.1093/pnasnexus/pgac136. eCollection 2022 Jul.
3
Functional Water Networks in Fully Hydrated Photosystem II.
完全水合的光系统 II 中的功能水网络。
J Am Chem Soc. 2022 Dec 7;144(48):22035-22050. doi: 10.1021/jacs.2c09121. Epub 2022 Nov 22.
4
Binding and functions of the two chloride ions in the oxygen-evolving center of photosystem II.结合态和两个氯离子在光合作用系统 II 的放氧中心的功能。
Photosynth Res. 2022 Sep;153(3):135-156. doi: 10.1007/s11120-022-00921-y. Epub 2022 Jun 13.
5
Structural dynamics in the water and proton channels of photosystem II during the S to S transition.在 S1 态到 S2 态转变过程中,光合作用系统 II 水通道和质子通道的结构动力学。
Nat Commun. 2021 Nov 11;12(1):6531. doi: 10.1038/s41467-021-26781-z.
6
Protein Motifs for Proton Transfers That Build the Transmembrane Proton Gradient.构建跨膜质子梯度的质子转移蛋白基序。
Front Chem. 2021 Jun 15;9:660954. doi: 10.3389/fchem.2021.660954. eCollection 2021.
7
Energetics and Kinetics of S-State Transitions Monitored by Delayed Chlorophyll Fluorescence.通过延迟叶绿素荧光监测的S态转变的能量学与动力学
Front Plant Sci. 2019 Mar 29;10:386. doi: 10.3389/fpls.2019.00386. eCollection 2019.
8
Proton Translocation via Tautomerization of Asn298 During the S-S State Transition in the Oxygen-Evolving Complex of Photosystem II.Asn298 通过互变异构质子转移在光系统 II 放氧复合物的 S-S 态跃迁过程中。
J Phys Chem B. 2019 Apr 11;123(14):3068-3078. doi: 10.1021/acs.jpcb.9b02317. Epub 2019 Mar 29.
9
D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine Y for proton exit during water oxidation.光系统II中的D1-Asn-298参与了氧化还原活性酪氨酸Y附近的氢键网络,该网络在水氧化过程中用于质子输出。
J Biol Chem. 2017 Dec 8;292(49):20046-20057. doi: 10.1074/jbc.M117.815183. Epub 2017 Oct 18.
10
Genetically introduced hydrogen bond interactions reveal an asymmetric charge distribution on the radical cation of the special-pair chlorophyll P680.基因引入的氢键相互作用揭示了特殊对叶绿素P680自由基阳离子上的不对称电荷分布。
J Biol Chem. 2017 May 5;292(18):7474-7486. doi: 10.1074/jbc.M117.781062. Epub 2017 Mar 16.