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光系统II中的D1-Asn-298参与了氧化还原活性酪氨酸Y附近的氢键网络,该网络在水氧化过程中用于质子输出。

D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine Y for proton exit during water oxidation.

作者信息

Nagao Ryo, Ueoka-Nakanishi Hanayo, Noguchi Takumi

机构信息

Division of Material Science, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan.

Division of Material Science, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan.

出版信息

J Biol Chem. 2017 Dec 8;292(49):20046-20057. doi: 10.1074/jbc.M117.815183. Epub 2017 Oct 18.

DOI:10.1074/jbc.M117.815183
PMID:29046348
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5723994/
Abstract

In photosynthetic water oxidation, two water molecules are converted into one oxygen molecule and four protons at the MnCaO cluster in photosystem II (PSII) via the S-state cycle. Efficient proton exit from the catalytic site to the lumen is essential for this process. However, the exit pathways of individual protons through the PSII proteins remain to be identified. In this study, we examined the involvement of a hydrogen-bond network near the redox-active tyrosine Y in proton transfer during the S-state cycle. We focused on spectroscopic analyses of a site-directed variant of D1-Asn-298, a residue involved in a hydrogen-bond network near Y We found that the D1-N298A mutant of sp. PCC 6803 exhibits an O evolution activity of ∼10% of the wild-type. D1-N298A and the wild-type D1 had very similar features of thermoluminescence glow curves and of an FTIR difference spectrum upon Y oxidation, suggesting that the hydrogen-bonded structure of Y and electron transfer from the MnCaO cluster to Y were little affected by substitution. In the D1-N298A mutant, however, the flash-number dependence of delayed luminescence showed a monotonic increase without oscillation, and FTIR difference spectra of the S-state cycle indicated partial and significant inhibition of the S → S and S → S transitions, respectively. These results suggest that the D1-N298A substitution inhibits the proton transfer processes in the S → S and S → S transitions. This in turn indicates that the hydrogen-bond network near Y can be functional as a proton transfer pathway during photosynthetic water oxidation.

摘要

在光合水氧化过程中,通过S态循环,两个水分子在光系统II(PSII)的MnCaO簇中被转化为一个氧分子和四个质子。质子从催化位点有效地排至内腔对于该过程至关重要。然而,单个质子通过PSII蛋白的排出途径仍有待确定。在本研究中,我们研究了氧化还原活性酪氨酸Y附近的氢键网络在S态循环期间质子转移中的作用。我们重点对D1-Asn-298的定点变体进行光谱分析,D1-Asn-298是Y附近氢键网络中的一个残基。我们发现集胞藻PCC 6803的D1-N298A突变体表现出约为野生型10%的放氧活性。D1-N298A和野生型D1在热发光辉光曲线以及Y氧化后的傅里叶变换红外差谱方面具有非常相似的特征,这表明Y的氢键结构以及从MnCaO簇到Y的电子转移受取代影响很小。然而,在D1-N298A突变体中,延迟发光的闪光数依赖性呈单调增加且无振荡,并且S态循环的傅里叶变换红外差谱分别表明S→S和S→S转变受到部分且显著的抑制。这些结果表明,D1-N298A取代抑制了S→S和S→S转变中的质子转移过程。这反过来表明Y附近的氢键网络在光合水氧化过程中可作为质子转移途径发挥作用。

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2
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J Am Chem Soc. 2017 Jul 12;139(27):9364-9375. doi: 10.1021/jacs.7b04924. Epub 2017 Jun 29.
3
Origins of Water Molecules in the Photosystem II Crystal Structure.光系统II晶体结构中水分子的起源
Biochemistry. 2017 Jun 20;56(24):3049-3057. doi: 10.1021/acs.biochem.7b00220. Epub 2017 Jun 7.
4
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Biochemistry. 2017 May 23;56(20):2558-2570. doi: 10.1021/acs.biochem.6b01278. Epub 2017 May 10.
5
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6
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9
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