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1
Towards controlling the glycoform: a model framework linking extracellular metabolites to antibody glycosylation.迈向控制糖型:一个将细胞外代谢物与抗体糖基化联系起来的模型框架。
Int J Mol Sci. 2014 Mar 14;15(3):4492-522. doi: 10.3390/ijms15034492.
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Biogenesis and functions of bacterial S-layers.细菌 S-层的生物发生和功能。
Nat Rev Microbiol. 2014 Mar;12(3):211-22. doi: 10.1038/nrmicro3213. Epub 2014 Feb 10.
3
Controllability analysis of protein glycosylation in CHO cells.CHO 细胞中蛋白质糖基化的可控性分析。
PLoS One. 2014 Feb 3;9(2):e87973. doi: 10.1371/journal.pone.0087973. eCollection 2014.
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The carbohydrate-active enzymes database (CAZy) in 2013.2013 版碳水化合物活性酶数据库(CAZy)。
Nucleic Acids Res. 2014 Jan;42(Database issue):D490-5. doi: 10.1093/nar/gkt1178. Epub 2013 Nov 21.
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Characterization of fibrinogen binding by glycoproteins Srr1 and Srr2 of Streptococcus agalactiae.鉴定粘性链球菌糖蛋白 Srr1 和 Srr2 对纤维蛋白原的结合特性。
J Biol Chem. 2013 Dec 13;288(50):35982-96. doi: 10.1074/jbc.M113.513358. Epub 2013 Oct 28.
6
Protein O-glucosylation in Lactobacillus buchneri.布氏乳杆菌的蛋白 O-糖基化。
Glycoconj J. 2014 Feb;31(2):117-31. doi: 10.1007/s10719-013-9505-7. Epub 2013 Oct 27.
7
N- and O-glycosylation in the murine synaptosome.鼠突触体中的 N- 和 O-糖基化。
Mol Cell Proteomics. 2013 Dec;12(12):3474-88. doi: 10.1074/mcp.M113.030007. Epub 2013 Jul 1.
8
A common pathway for O-linked protein-glycosylation and synthesis of capsule in Acinetobacter baumannii.鲍曼不动杆菌 O-连接糖蛋白糖基化和荚膜合成的共同途径。
Mol Microbiol. 2013 Sep;89(5):816-30. doi: 10.1111/mmi.12300. Epub 2013 Jul 12.
9
O-glycosylation as a novel control mechanism of peptidoglycan hydrolase activity.O-糖基化作为肽聚糖水解酶活性的一种新的调控机制。
J Biol Chem. 2013 Aug 2;288(31):22233-47. doi: 10.1074/jbc.M113.470716. Epub 2013 Jun 12.
10
Role of the serine-rich surface glycoprotein Srr1 of Streptococcus agalactiae in the pathogenesis of infective endocarditis.无乳链球菌丝氨酸丰富的表面糖蛋白 Srr1 在感染性心内膜炎发病机制中的作用。
PLoS One. 2013 May 23;8(5):e64204. doi: 10.1371/journal.pone.0064204. Print 2013.

通过质谱法探究无乳链球菌富含丝氨酸的黏附素Srr1 N端区域的O-糖基化作用。

O-Glycosylation of the N-terminal region of the serine-rich adhesin Srr1 of Streptococcus agalactiae explored by mass spectrometry.

作者信息

Chaze Thibault, Guillot Alain, Valot Benoît, Langella Olivier, Chamot-Rooke Julia, Di Guilmi Anne-Marie, Trieu-Cuot Patrick, Dramsi Shaynoor, Mistou Michel-Yves

机构信息

From the ‡INRA, MICALIS UMR-1319, 78352 Jouy-en-Josas cedex, France; §AgroParisTech, MICALIS UMR-1319, 78352 Jouy-en-Josas cedex, France; ¶¶Institut Pasteur, Unité de Spectrométrie de Masse Structurale et Protéomique, 28 rue du Dr Roux, 75015 Paris, France;

¶INRA, PAPPSO, MICALIS UMR-1319, 78352 Jouy en Josas cedex, France;

出版信息

Mol Cell Proteomics. 2014 Sep;13(9):2168-82. doi: 10.1074/mcp.M114.038075. Epub 2014 May 5.

DOI:10.1074/mcp.M114.038075
PMID:24797265
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4159642/
Abstract

Serine-rich (Srr) proteins exposed at the surface of Gram-positive bacteria are a family of adhesins that contribute to the virulence of pathogenic staphylococci and streptococci. Lectin-binding experiments have previously shown that Srr proteins are heavily glycosylated. We report here the first mass-spectrometry analysis of the glycosylation of Streptococcus agalactiae Srr1. After Srr1 enrichment and trypsin digestion, potential glycopeptides were identified in collision induced dissociation spectra using X! Tandem. The approach was then refined using higher energy collisional dissociation fragmentation which led to the simultaneous loss of sugar residues, production of diagnostic oxonium ions and backbone fragmentation for glycopeptides. This feature was exploited in a new open source software tool (SpectrumFinder) developed for this work. By combining these approaches, 27 glycopeptides corresponding to six different segments of the N-terminal region of Srr1 [93-639] were identified. Our data unambiguously indicate that the same protein residue can be modified with different glycan combinations including N-acetylhexosamine, hexose, and a novel modification that was identified as O-acetylated-N-acetylhexosamine. Lectin binding and monosaccharide composition analysis strongly suggested that HexNAc and Hex correspond to N-acetylglucosamine and glucose, respectively. The same protein segment can be modified with a variety of glycans generating a wide structural diversity of Srr1. Electron transfer dissociation was used to assign glycosylation sites leading to the unambiguous identification of six serines and one threonine residues. Analysis of purified Srr1 produced in mutant strains lacking accessory glycosyltransferase encoding genes demonstrates that O-GlcNAcylation is an initial step in Srr1 glycosylation that is likely required for subsequent decoration with Hex. In summary, our data obtained by a combination of fragmentation mass spectrometry techniques associated to a new software tool, demonstrate glycosylation heterogeneity of Srr1, characterize a new protein modification, and identify six glycosylation sites located in the N-terminal region of the protein.

摘要

暴露于革兰氏阳性菌表面的富含丝氨酸(Srr)蛋白是一类粘附素,对致病性葡萄球菌和链球菌的毒力有影响。凝集素结合实验先前已表明Srr蛋白高度糖基化。我们在此报告对无乳链球菌Srr1糖基化的首次质谱分析。在Srr1富集和胰蛋白酶消化后,使用X! Tandem在碰撞诱导解离光谱中鉴定潜在的糖肽。然后使用更高能量的碰撞解离碎片化对该方法进行优化,这导致糖残基同时丢失、产生诊断性的鎓离子以及糖肽的主链碎片化。此特性在为此项工作开发的新开源软件工具(SpectrumFinder)中得到利用。通过结合这些方法,鉴定出了与Srr1 [93 - 639] N端区域六个不同片段相对应的27个糖肽。我们的数据明确表明,同一蛋白质残基可被不同的聚糖组合修饰,包括N - 乙酰己糖胺、己糖,以及一种被鉴定为O - 乙酰化 - N - 乙酰己糖胺的新修饰。凝集素结合和单糖组成分析强烈表明,HexNAc和Hex分别对应于N - 乙酰葡糖胺和葡萄糖。同一蛋白质片段可被多种聚糖修饰,从而产生Srr1广泛的结构多样性。使用电子转移解离来确定糖基化位点,从而明确鉴定出六个丝氨酸和一个苏氨酸残基。对在缺乏辅助糖基转移酶编码基因的突变菌株中产生的纯化Srr1的分析表明,O - GlcNAcylation是Srr1糖基化的初始步骤,这可能是随后用Hex修饰所必需的。总之,我们通过与新软件工具相关联的碎片化质谱技术组合获得的数据,证明了Srr1的糖基化异质性,表征了一种新的蛋白质修饰,并鉴定出位于该蛋白质N端区域的六个糖基化位点。