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本文引用的文献

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Cell. 2013 Mar 28;153(1):193-205. doi: 10.1016/j.cell.2013.02.033.
2
Long non-coding RNA targeting and transcriptional de-repression.靶向长非编码 RNA 和转录去阻遏。
Nucleic Acid Ther. 2013 Feb;23(1):9-14. doi: 10.1089/nat.2012.0412.
3
The RdDM pathway is required for basal heat tolerance in Arabidopsis.RdDM 通路是拟南芥基础耐热性所必需的。
Mol Plant. 2013 Mar;6(2):396-410. doi: 10.1093/mp/sst023. Epub 2013 Feb 1.
4
PEP1 of Arabis alpina is encoded by two overlapping genes that contribute to natural genetic variation in perennial flowering.高山紫菀 PEP1 由两个重叠基因编码,这些基因有助于多年生开花的自然遗传变异。
PLoS Genet. 2012;8(12):e1003130. doi: 10.1371/journal.pgen.1003130. Epub 2012 Dec 20.
5
Genetic rearrangements can modify chromatin features at epialleles.遗传重排可以修饰表观等位基因上的染色质特征。
PLoS Genet. 2011 Oct;7(10):e1002331. doi: 10.1371/journal.pgen.1002331. Epub 2011 Oct 20.
6
Identification of genes required for de novo DNA methylation in Arabidopsis.鉴定拟南芥中从头 DNA 甲基化所需的基因。
Epigenetics. 2011 Mar;6(3):344-54. doi: 10.4161/epi.6.3.14242. Epub 2011 Mar 1.
7
Vernalization-mediated epigenetic silencing by a long intronic noncoding RNA.春化作用介导的长内含子非编码 RNA 的表观遗传沉默。
Science. 2011 Jan 7;331(6013):76-9. doi: 10.1126/science.1197349. Epub 2010 Dec 2.
8
Establishing, maintaining and modifying DNA methylation patterns in plants and animals.建立、维持和修改动植物中的 DNA 甲基化模式。
Nat Rev Genet. 2010 Mar;11(3):204-20. doi: 10.1038/nrg2719.
9
Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target.冷诱导的拟南芥多梳靶基因的长反义转录本沉默。
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10
Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis.RNA聚合酶II的基因间转录在拟南芥的小干扰RNA定向转录基因沉默过程中协调聚合酶IV和聚合酶V。
Genes Dev. 2009 Dec 15;23(24):2850-60. doi: 10.1101/gad.1868009.

拟南芥中表观遗传调控的潜在机制。

Mechanisms underlying epigenetic regulation in Arabidopsis thaliana.

作者信息

Jones Ashley L, Sung Sibum

机构信息

Department of Molecular Biosciences and Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA.

Department of Molecular Biosciences and Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA

出版信息

Integr Comp Biol. 2014 Jul;54(1):61-7. doi: 10.1093/icb/icu030. Epub 2014 May 7.

DOI:10.1093/icb/icu030
PMID:24808013
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4133573/
Abstract

In plants, epigenetic regulation mediates both the proper development of the plant and responses to environmental cues. Changes in epigenetic states employ DNA methylation, histone modification, and regulatory RNAs. In Arabidopsis thaliana, DNA methylation as a repressive mark is often associated with constitutively silenced loci, such as repetitive sequences, transposons, and heterochromatin. These sequences regularly give rise to small interfering RNAs, which direct DNA methylation through the RNA-directed DNA methylation (RdDM) pathway. For example, FWA locus is silenced in sporophytes and enriched with DNA methylation. Its methylated state is stable and passes to the next generation. This is an example of meiotically inherited epigenetic states. There are also epigenetic changes that can be inherited mitotically and are subsequently erased in the next generation. In this review, we use the vernalization-mediated epigenetic silencing of FLOWERING LOCUS C (FLC) as an example for this type of mitotically stable epigenetic state. Here, we discuss mechanisms of epigenetic changes that can result in meiotically or mitotically stable states with an emphasis on FWA and FLC as two examples.

摘要

在植物中,表观遗传调控介导植物的正常发育以及对环境信号的响应。表观遗传状态的改变涉及DNA甲基化、组蛋白修饰和调控RNA。在拟南芥中,作为一种抑制标记的DNA甲基化通常与组成型沉默位点相关,如重复序列、转座子和异染色质。这些序列经常产生小干扰RNA,其通过RNA指导的DNA甲基化(RdDM)途径指导DNA甲基化。例如,FWA基因座在孢子体中沉默并富含DNA甲基化。其甲基化状态稳定并传递给下一代。这是减数分裂遗传表观遗传状态的一个例子。也存在可通过有丝分裂遗传并随后在下一代中消除的表观遗传变化。在本综述中,我们以开花位点C(FLC)的春化介导的表观遗传沉默为例来说明这种有丝分裂稳定的表观遗传状态。在此,我们讨论可导致减数分裂或有丝分裂稳定状态的表观遗传变化机制,重点以FWA和FLC为例。