• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

红外激光诱导的蛋白质晶体转变。

IR laser-induced protein crystal transformation.

作者信息

Kiefersauer Reiner, Grandl Brigitte, Krapp Stephan, Huber Robert

机构信息

Max-Planck-Institut für Biochemie, Am Klopferspitz 18, 82152 Martinsried, Germany.

Proteros Biostructures GmbH, Bunsenstrasse 7a, 82152 Martinsried, Germany.

出版信息

Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1224-32. doi: 10.1107/S1399004714002223. Epub 2014 Apr 26.

DOI:10.1107/S1399004714002223
PMID:24816092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4014118/
Abstract

A method and the design of instrumentation, and its preliminary practical realisation, including test experiments, with the object of inducing phase changes of biomolecular crystals by controlled dehydration through heating with infrared (IR) light are described. The aim is to generate and select crystalline phases through transformation in the solid state which have improved order (higher resolution in X-ray diffraction experiments) and reduced mosaic spread (more uniformly aligned mosaic blocks) for diffraction data collection and analysis. The crystal is heated by pulsed and/or constant IR laser irradiation. Loss of crystal water following heating and its reabsorption through equilibration with the environment is measured optically by a video system. Heating proved superior to traditional controlled dehydration by humidity change for the test cases CODH (carbon monoxide dehydrogenase) and CLK2 (a protein kinase). Heating with IR light is experimentally simple and offers an exploration of a much broader parameter space than the traditional method, as it allows the option of varying the rate of phase changes through modification of the IR pulse strength, width and repeat frequency. It impacts the crystal instantaneously, isotropically and homogeneously, and is therefore expected to cause less mechanical stress.

摘要

本文描述了一种方法、仪器设计及其初步实际实现,包括测试实验,其目的是通过红外(IR)光加热控制脱水来诱导生物分子晶体的相变。目的是通过固态转变产生并选择具有更高有序度(在X射线衍射实验中具有更高分辨率)和更小镶嵌扩展(镶嵌块排列更均匀)的晶相,用于衍射数据收集和分析。晶体通过脉冲和/或连续红外激光照射加热。加热后晶体水的损失及其通过与环境平衡的再吸收通过视频系统进行光学测量。对于测试案例一氧化碳脱氢酶(CODH)和一种蛋白激酶(CLK2),加热被证明优于传统的通过湿度变化进行的控制脱水。红外光加热在实验上很简单,并且与传统方法相比,它提供了对更广泛参数空间的探索,因为它允许通过改变红外脉冲强度、宽度和重复频率来改变相变速率。它对晶体的影响是即时、各向同性和均匀的,因此预计会产生较小的机械应力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/ce1fae5b93cd/d-70-01224-fig11.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/8032916d12b7/d-70-01224-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/6fcc886ad7ee/d-70-01224-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/6f8779c5bf81/d-70-01224-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/f953b560be2b/d-70-01224-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/6213e5544648/d-70-01224-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/5899fd4be623/d-70-01224-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/12a29717a303/d-70-01224-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/062fc9aab8de/d-70-01224-fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/42e297bc4bf5/d-70-01224-fig9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/2d24ed6f64d4/d-70-01224-fig10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/ce1fae5b93cd/d-70-01224-fig11.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/8032916d12b7/d-70-01224-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/6fcc886ad7ee/d-70-01224-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/6f8779c5bf81/d-70-01224-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/f953b560be2b/d-70-01224-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/6213e5544648/d-70-01224-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/5899fd4be623/d-70-01224-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/12a29717a303/d-70-01224-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/062fc9aab8de/d-70-01224-fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/42e297bc4bf5/d-70-01224-fig9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/2d24ed6f64d4/d-70-01224-fig10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/70d7/4014118/ce1fae5b93cd/d-70-01224-fig11.jpg

相似文献

1
IR laser-induced protein crystal transformation.红外激光诱导的蛋白质晶体转变。
Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1224-32. doi: 10.1107/S1399004714002223. Epub 2014 Apr 26.
2
X-Ray Crystallography of Carbon Monoxide Dehydrogenases.一氧化碳脱氢酶的X射线晶体学
Methods Mol Biol. 2019;1876:167-178. doi: 10.1007/978-1-4939-8864-8_11.
3
The effect of intracellular molybdenum in Hydrogenophaga pseudoflava on the crystallographic structure of the seleno-molybdo-iron-sulfur flavoenzyme carbon monoxide dehydrogenase.嗜氢假黄杆菌中细胞内钼对含硒钼铁硫黄素酶一氧化碳脱氢酶晶体结构的影响。
J Mol Biol. 2000 Sep 1;301(5):1221-35. doi: 10.1006/jmbi.2000.4023.
4
Carbon Monoxide Dehydrogenase Reduces Cyanate to Cyanide.一氧化碳脱氢酶将氰酸盐还原为氰化物。
Angew Chem Int Ed Engl. 2017 Jun 19;56(26):7398-7401. doi: 10.1002/anie.201703225. Epub 2017 May 23.
5
Crystallographic snapshots of cyanide- and water-bound C-clusters from bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.来自双功能一氧化碳脱氢酶/乙酰辅酶A合酶的与氰化物和水结合的C簇的晶体学快照。
Biochemistry. 2009 Aug 11;48(31):7432-40. doi: 10.1021/bi900574h.
6
The Ni-containing carbon monoxide dehydrogenase family: light at the end of the tunnel?含镍一氧化碳脱氢酶家族:曙光在前?
Biochemistry. 2002 Feb 19;41(7):2097-105. doi: 10.1021/bi015932+.
7
Carbon monoxide induced decomposition of the active site [Ni-4Fe-5S] cluster of CO dehydrogenase.一氧化碳诱导一氧化碳脱氢酶活性位点[Ni-4Fe-5S]簇的分解。
J Am Chem Soc. 2004 May 5;126(17):5382-7. doi: 10.1021/ja037776v.
8
The metalloclusters of carbon monoxide dehydrogenase/acetyl-CoA synthase: a story in pictures.一氧化碳脱氢酶/乙酰辅酶A合成酶的金属簇:一个用图片讲述的故事。
J Biol Inorg Chem. 2004 Jul;9(5):511-5. doi: 10.1007/s00775-004-0563-y. Epub 2004 Jun 18.
9
Gas channel rerouting in a primordial enzyme: Structural insights of the carbon-monoxide dehydrogenase/acetyl-CoA synthase complex from the acetogen Clostridium autoethanogenum.原始酶中的气体通道重排:来自自养乙醇梭菌的一氧化碳脱氢酶/乙酰辅酶A合酶复合物的结构见解
Biochim Biophys Acta Bioenerg. 2021 Jan 1;1862(1):148330. doi: 10.1016/j.bbabio.2020.148330. Epub 2020 Oct 17.
10
Structural insight into metallocofactor maturation in carbon monoxide dehydrogenase.一氧化碳脱氢酶中金属辅因子成熟的结构见解。
J Biol Chem. 2019 Aug 30;294(35):13017-13026. doi: 10.1074/jbc.RA119.009610. Epub 2019 Jul 11.

引用本文的文献

1
Aerosol-based ligand soaking of reservoir-free protein crystals.基于气溶胶的无储液池蛋白质晶体配体浸泡法。
J Appl Crystallogr. 2021 May 28;54(Pt 3):895-902. doi: 10.1107/S1600576721003551. eCollection 2021 Jun 1.
2
The Y. bercovieri Anbu crystal structure sheds light on the evolution of highly (pseudo)symmetric multimers.Y. bercovieri Anbu 晶体结构揭示了高度(拟)对称多聚体进化的奥秘。
J Mol Biol. 2018 Mar 2;430(5):611-627. doi: 10.1016/j.jmb.2017.11.016. Epub 2017 Dec 16.
3
Crystal Dehydration in Membrane Protein Crystallography.

本文引用的文献

1
Using high-throughput in situ plate screening to evaluate the effect of dehydration on protein crystals.使用高通量原位平板筛选来评估脱水对蛋白质晶体的影响。
Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):920-3. doi: 10.1107/S0907444913002412. Epub 2013 Apr 19.
2
Crystallization, dehydration and experimental phasing of WbdD, a bifunctional kinase and methyltransferase from Escherichia coli O9a.来自大肠杆菌O9a的双功能激酶和甲基转移酶WbdD的结晶、脱水及实验相位分析
Acta Crystallogr D Biol Crystallogr. 2012 Oct;68(Pt 10):1371-9. doi: 10.1107/S0907444912029599. Epub 2012 Sep 18.
3
Increasing the X-ray diffraction power of protein crystals by dehydration: the case of bovine serum albumin and a survey of literature data.
膜蛋白晶体学中的晶体脱水
Adv Exp Med Biol. 2016;922:73-89. doi: 10.1007/978-3-319-35072-1_6.
4
Structural and biochemical characterization of the cell fate determining nucleotidyltransferase fold protein MAB21L1.细胞命运决定核苷酸转移酶折叠蛋白MAB21L1的结构与生化特性
Sci Rep. 2016 Jun 8;6:27498. doi: 10.1038/srep27498.
5
A generic protocol for protein crystal dehydration using the HC1b humidity controller.一种使用HC1b湿度控制器进行蛋白质晶体脱水的通用方案。
Acta Crystallogr D Struct Biol. 2016 May;72(Pt 5):629-40. doi: 10.1107/S2059798316003065. Epub 2016 Apr 26.
6
Improving diffraction resolution using a new dehydration method.使用一种新的脱水方法提高衍射分辨率。
Acta Crystallogr F Struct Biol Commun. 2016 Feb;72(Pt 2):152-9. doi: 10.1107/S2053230X16000261. Epub 2016 Jan 28.
通过脱水提高蛋白质晶体的X射线衍射能力:以牛血清白蛋白为例及文献数据综述
Int J Mol Sci. 2012;13(3):3782-3800. doi: 10.3390/ijms13033782. Epub 2012 Mar 21.
4
Humidity control can compensate for the damage induced in protein crystals by alien solutions.湿度控制可以弥补外来溶液对蛋白质晶体造成的损害。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Oct 1;67(Pt 10):1300-8. doi: 10.1107/S174430911103377X. Epub 2011 Sep 29.
5
Direct cryocooling of naked crystals: are cryoprotection agents always necessary?裸晶体的直接低温冷却:冷冻保护剂总是必要的吗?
Acta Crystallogr D Biol Crystallogr. 2011 Oct;67(Pt 10):902-6. doi: 10.1107/S0907444911031210. Epub 2011 Sep 8.
6
Key factors for successful generation of protein-fragment structures requirement on protein, crystals, and technology.成功生成蛋白质片段结构的关键因素在于对蛋白质、晶体和技术的要求。
Methods Enzymol. 2011;493:61-89. doi: 10.1016/B978-0-12-381274-2.00003-0.
7
Improving diffraction by humidity control: a novel device compatible with X-ray beamlines.通过湿度控制改善衍射:一种与X射线束线兼容的新型装置。
Acta Crystallogr D Biol Crystallogr. 2009 Dec;65(Pt 12):1237-46. doi: 10.1107/S0907444909037822. Epub 2009 Nov 17.
8
Humidity control as a strategy for lattice optimization applied to crystals of HLA-A*1101 complexed with variant peptides from dengue virus.将湿度控制作为一种晶格优化策略应用于与登革病毒变异肽复合的HLA-A*1101晶体。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 May 1;63(Pt 5):386-92. doi: 10.1107/S1744309107013693. Epub 2007 Apr 6.
9
Crystallography for protein kinase drug design: PKA and SRC case studies.用于蛋白激酶药物设计的晶体学:蛋白激酶A和Src的案例研究
Biochim Biophys Acta. 2005 Dec 30;1754(1-2):38-49. doi: 10.1016/j.bbapap.2005.09.014. Epub 2005 Oct 21.
10
Post-crystallization treatments for improving diffraction quality of protein crystals.用于提高蛋白质晶体衍射质量的结晶后处理方法。
Acta Crystallogr D Biol Crystallogr. 2005 Sep;61(Pt 9):1173-80. doi: 10.1107/S0907444905019451. Epub 2005 Aug 16.