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利用共振拉曼光谱法对血红蛋白晶体结构中的氧化还原和配体状态进行指纹识别。

Fingerprinting redox and ligand states in haemprotein crystal structures using resonance Raman spectroscopy.

作者信息

Kekilli Demet, Dworkowski Florian S N, Pompidor Guillaume, Fuchs Martin R, Andrew Colin R, Antonyuk Svetlana, Strange Richard W, Eady Robert R, Hasnain S Samar, Hough Michael A

机构信息

School of Biological Sciences, University of Essex, Wivenhoe Park, Colchester CO4 3SQ, England.

Swiss Light Source, Paul Scherrer Institut, CH-5232 Villigen PSI, Switzerland.

出版信息

Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1289-96. doi: 10.1107/S1399004714004039. Epub 2014 Apr 29.

Abstract

It is crucial to assign the correct redox and ligand states to crystal structures of proteins with an active redox centre to gain valid functional information and prevent the misinterpretation of structures. Single-crystal spectroscopies, particularly when applied in situ at macromolecular crystallography beamlines, allow spectroscopic investigations of redox and ligand states and the identification of reaction intermediates in protein crystals during the collection of structural data. Single-crystal resonance Raman spectroscopy was carried out in combination with macromolecular crystallography on Swiss Light Source beamline X10SA using cytochrome c' from Alcaligenes xylosoxidans. This allowed the fingerprinting and validation of different redox and ligand states, identification of vibrational modes and identification of intermediates together with monitoring of radiation-induced changes. This combined approach provides a powerful tool to obtain complementary data and correctly assign the true oxidation and ligand state(s) in redox-protein crystals.

摘要

对于具有活性氧化还原中心的蛋白质晶体结构,正确指定其氧化还原和配体状态至关重要,这有助于获取有效的功能信息并防止对结构的错误解读。单晶光谱学,特别是在大分子晶体学光束线原位应用时,能够在收集结构数据的过程中对蛋白质晶体中的氧化还原和配体状态进行光谱研究,并鉴定反应中间体。使用木糖氧化产碱杆菌的细胞色素c',在瑞士光源光束线X10SA上结合大分子晶体学进行了单晶共振拉曼光谱研究。这使得能够对不同的氧化还原和配体状态进行指纹识别和验证,识别振动模式,鉴定中间体,并监测辐射诱导的变化。这种联合方法提供了一个强大的工具,用于获取互补数据并正确指定氧化还原蛋白晶体中的真实氧化和配体状态。

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