• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

谷氨酸转运体转运循环中离子结合与结构转变的耦合

Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.

作者信息

Verdon Grégory, Oh SeCheol, Serio Ryan N, Boudker Olga

机构信息

Department of Physiology and Biophysics, Weill Cornell Medical College, New York, United States

Department of Physiology and Biophysics, Weill Cornell Medical College, New York, United States.

出版信息

Elife. 2014 May 19;3:e02283. doi: 10.7554/eLife.02283.

DOI:10.7554/eLife.02283
PMID:24842876
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4051121/
Abstract

Membrane transporters that clear the neurotransmitter glutamate from synapses are driven by symport of sodium ions and counter-transport of a potassium ion. Previous crystal structures of a homologous archaeal sodium and aspartate symporter showed that a dedicated transport domain carries the substrate and ions across the membrane. Here, we report new crystal structures of this homologue in ligand-free and ions-only bound outward- and inward-facing conformations. We show that after ligand release, the apo transport domain adopts a compact and occluded conformation that can traverse the membrane, completing the transport cycle. Sodium binding primes the transport domain to accept its substrate and triggers extracellular gate opening, which prevents inward domain translocation until substrate binding takes place. Furthermore, we describe a new cation-binding site ideally suited to bind a counter-transported ion. We suggest that potassium binding at this site stabilizes the translocation-competent conformation of the unloaded transport domain in mammalian homologues.DOI: http://dx.doi.org/10.7554/eLife.02283.001.

摘要

从突触清除神经递质谷氨酸的膜转运蛋白由钠离子同向转运和钾离子反向转运驱动。同源古菌钠和天冬氨酸同向转运体的先前晶体结构表明,一个专门的转运结构域携带底物和离子穿过膜。在这里,我们报告了该同源物在无配体和仅结合离子的外向和内向构象下的新晶体结构。我们表明,在配体释放后,脱辅基转运结构域采用紧凑且封闭的构象,该构象可以穿过膜,完成转运循环。钠结合使转运结构域准备好接受其底物并触发细胞外门打开,这会阻止结构域向内转运,直到底物结合发生。此外,我们描述了一个非常适合结合反向转运离子的新阳离子结合位点。我们认为,该位点的钾结合稳定了哺乳动物同源物中卸载的转运结构域的易位能力构象。DOI: http://dx.doi.org/10.7554/eLife.02283.001 。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/ef1ec3494644/elife02283f010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/f71fbe5eec85/elife02283f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/f10255ec6eac/elife02283fs001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/bec7db75fa27/elife02283fs002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/2541f57dd9ad/elife02283f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/e8985ad0453a/elife02283f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/5ffebca25130/elife02283fs003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/dcf8d7fd5818/elife02283fs004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/ddbe13b89d37/elife02283f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/e83a3259b6e8/elife02283fs005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/b5a787179e2d/elife02283f005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/52ac428df8f5/elife02283f006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/b97fb45c8f8e/elife02283fs006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/08f191515a21/elife02283fs007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/0798b9d667af/elife02283fs008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/d0e1d9588f36/elife02283f007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/57ca35c07db4/elife02283f008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/7a614bbb4b3d/elife02283fs009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/6262e6a0ba83/elife02283fs010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/53839dd2f240/elife02283f009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/a8cd6318b641/elife02283fs011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/5e7853b1d7ac/elife02283fs012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/ef1ec3494644/elife02283f010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/f71fbe5eec85/elife02283f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/f10255ec6eac/elife02283fs001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/bec7db75fa27/elife02283fs002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/2541f57dd9ad/elife02283f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/e8985ad0453a/elife02283f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/5ffebca25130/elife02283fs003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/dcf8d7fd5818/elife02283fs004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/ddbe13b89d37/elife02283f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/e83a3259b6e8/elife02283fs005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/b5a787179e2d/elife02283f005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/52ac428df8f5/elife02283f006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/b97fb45c8f8e/elife02283fs006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/08f191515a21/elife02283fs007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/0798b9d667af/elife02283fs008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/d0e1d9588f36/elife02283f007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/57ca35c07db4/elife02283f008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/7a614bbb4b3d/elife02283fs009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/6262e6a0ba83/elife02283fs010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/53839dd2f240/elife02283f009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/a8cd6318b641/elife02283fs011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/5e7853b1d7ac/elife02283fs012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2256/4051121/ef1ec3494644/elife02283f010.jpg

相似文献

1
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.谷氨酸转运体转运循环中离子结合与结构转变的耦合
Elife. 2014 May 19;3:e02283. doi: 10.7554/eLife.02283.
2
Kinetic mechanism of coupled binding in sodium-aspartate symporter GltPh.钠-天冬氨酸共转运体 GltPh 偶联结合的动力学机制。
Elife. 2018 Sep 26;7:e37291. doi: 10.7554/eLife.37291.
3
Symport and antiport mechanisms of human glutamate transporters.人谷氨酸转运体的协同转运和反向转运机制。
Nat Commun. 2023 May 4;14(1):2579. doi: 10.1038/s41467-023-38120-5.
4
Structural ensemble of a glutamate transporter homologue in lipid nanodisc environment.脂质纳米盘环境中谷氨酸转运蛋白同源物的结构组合。
Nat Commun. 2020 Feb 21;11(1):998. doi: 10.1038/s41467-020-14834-8.
5
Transport mechanism of a bacterial homologue of glutamate transporters.谷氨酸转运体细菌同源物的转运机制。
Nature. 2009 Dec 17;462(7275):880-5. doi: 10.1038/nature08616. Epub 2009 Nov 18.
6
Identification of the third Na+ site and the sequence of extracellular binding events in the glutamate transporter.鉴定谷氨酸转运体中的第三个 Na+ 结合位点和细胞外结合事件的序列。
Biophys J. 2010 Sep 8;99(5):1416-25. doi: 10.1016/j.bpj.2010.06.052.
7
Direct visualization of glutamate transporter elevator mechanism by high-speed AFM.高速原子力显微镜直接可视化谷氨酸转运体提升机制。
Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):1584-1588. doi: 10.1073/pnas.1616413114. Epub 2017 Jan 30.
8
Molecular dynamics simulations elucidate the mechanism of proton transport in the glutamate transporter EAAT3.分子动力学模拟阐明了谷氨酸转运体EAAT3中质子转运的机制。
Biophys J. 2014 Jun 17;106(12):2675-83. doi: 10.1016/j.bpj.2014.05.010.
9
Large domain movements through the lipid bilayer mediate substrate release and inhibition of glutamate transporters.大结构域通过脂质双层的运动介导底物释放和谷氨酸转运体的抑制。
Elife. 2020 Nov 6;9:e58417. doi: 10.7554/eLife.58417.
10
Coupled binding mechanism of three sodium ions and aspartate in the glutamate transporter homologue Glt.谷氨酸转运体同源物 Glt 中三个钠离子与天冬氨酸偶联结合的机制。
Nat Commun. 2016 Nov 10;7:13420. doi: 10.1038/ncomms13420.

引用本文的文献

1
Evolutionary analysis reveals the origin of sodium coupling in glutamate transporters.进化分析揭示了谷氨酸转运体中钠偶联的起源。
Nat Struct Mol Biol. 2025 Aug 25. doi: 10.1038/s41594-025-01652-z.
2
Mechanism and Structure-Guided Optimization of SLC1A1/EAAT3-Selective Inhibitors in Kidney Cancer.肾癌中SLC1A1/EAAT3选择性抑制剂的作用机制及基于结构的优化
bioRxiv. 2025 Jul 7:2025.07.03.663021. doi: 10.1101/2025.07.03.663021.
3
Structural basis of excitatory amino acid transporter 3 substrate recognition.兴奋性氨基酸转运体3底物识别的结构基础

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Unsynchronised subunit motion in single trimeric sodium-coupled aspartate transporters.单体三聚体钠离子协同型天冬氨酸转运体中未同步的亚基运动。
Nature. 2013 Oct 3;502(7469):119-23. doi: 10.1038/nature12538.
3
Crystal structure of a substrate-free aspartate transporter.无底物天冬氨酸转运蛋白的晶体结构。
Proc Natl Acad Sci U S A. 2025 Apr 22;122(16):e2501627122. doi: 10.1073/pnas.2501627122. Epub 2025 Apr 18.
4
Conformational free energy landscape of a glutamate transporter and microscopic details of its transport mechanism.谷氨酸转运体的构象自由能景观及其转运机制的微观细节。
Proc Natl Acad Sci U S A. 2025 Mar 11;122(10):e2416381122. doi: 10.1073/pnas.2416381122. Epub 2025 Mar 5.
5
A structural biology compatible file format for atomic force microscopy.一种适用于原子力显微镜的结构生物学兼容文件格式。
Nat Commun. 2025 Feb 15;16(1):1671. doi: 10.1038/s41467-025-56760-7.
6
Free fatty acids inhibit an ion-coupled membrane transporter by dissipating the ion gradient.游离脂肪酸通过耗散离子梯度来抑制离子偶联膜转运体。
J Biol Chem. 2024 Dec;300(12):107955. doi: 10.1016/j.jbc.2024.107955. Epub 2024 Nov 2.
7
Structural basis of the excitatory amino acid transporter 3 substrate recognition.兴奋性氨基酸转运体3底物识别的结构基础
bioRxiv. 2024 Sep 8:2024.09.05.611541. doi: 10.1101/2024.09.05.611541.
8
Structural basis of the obligatory exchange mode of human neutral amino acid transporter ASCT2.人中性氨基酸转运蛋白 ASCT2 必需交换模式的结构基础。
Nat Commun. 2024 Aug 3;15(1):6570. doi: 10.1038/s41467-024-50888-8.
9
HS-AFM single-molecule structural biology uncovers basis of transporter wanderlust kinetics.HS-AFM 单分子结构生物学揭示了转运蛋白“流浪癖”动力学的基础。
Nat Struct Mol Biol. 2024 Aug;31(8):1286-1295. doi: 10.1038/s41594-024-01260-3. Epub 2024 Apr 17.
10
Conformational free-energy landscapes of a Na/Ca exchanger explain its alternating-access mechanism and functional specificity.构象自由能景观揭示了钠/钙交换器的交替存取机制和功能特异性。
Proc Natl Acad Sci U S A. 2024 Apr 16;121(16):e2318009121. doi: 10.1073/pnas.2318009121. Epub 2024 Apr 8.
Nat Struct Mol Biol. 2013 Oct;20(10):1224-6. doi: 10.1038/nsmb.2663. Epub 2013 Sep 8.
4
Novel dicarboxylate selectivity in an insect glutamate transporter homolog.昆虫谷氨酸转运蛋白同源物中的新型二羧酸选择性。
PLoS One. 2013 Aug 7;8(8):e70947. doi: 10.1371/journal.pone.0070947. eCollection 2013.
5
Transport dynamics in a glutamate transporter homologue.谷氨酸转运体同源物中的转运动力学。
Nature. 2013 Oct 3;502(7469):114-8. doi: 10.1038/nature12265. Epub 2013 Jun 23.
6
Transient formation of water-conducting states in membrane transporters.膜转运蛋白中瞬态水通道状态的形成。
Proc Natl Acad Sci U S A. 2013 May 7;110(19):7696-701. doi: 10.1073/pnas.1218986110. Epub 2013 Apr 22.
7
Mechanism and energetics of ligand release in the aspartate transporter GltPh.天冬氨酸转运蛋白 GltPh 中配体释放的机制和能量学。
J Phys Chem B. 2013 May 9;117(18):5486-96. doi: 10.1021/jp4010423. Epub 2013 May 1.
8
Binding thermodynamics of a glutamate transporter homolog.谷氨酸转运体同源物的结合热力学。
Nat Struct Mol Biol. 2013 May;20(5):634-40. doi: 10.1038/nsmb.2548. Epub 2013 Apr 7.
9
Intracellular gating in an inward-facing state of aspartate transporter Glt(Ph) is regulated by the movements of the helical hairpin HP2.天冬氨酸转运体 Glt(Ph) 内向构象的胞内门控由螺旋发夹 HP2 的运动调节。
J Biol Chem. 2013 Mar 22;288(12):8231-8237. doi: 10.1074/jbc.M112.438432. Epub 2013 Feb 5.
10
Conformational heterogeneity of the aspartate transporter Glt(Ph).天冬氨酸转运蛋白 Glt(Ph)的构象异质性。
Nat Struct Mol Biol. 2013 Feb;20(2):210-4. doi: 10.1038/nsmb.2471. Epub 2013 Jan 20.