1. 1 Laboratory of Neurooncology and Genetics, Neuroscience Institute, Medical Academy, Lithuanian University of Health Sciences, Eiveniu str. 4, LT-50009, Kaunas, Lithuania.
2. 2 Department of Neurosurgery, Medical Academy, Lithuanian University of Health Sciences, Eiveniu str. 2, LT-50009, Kaunas, Lithuania.
J Cancer. 2014 May 13;5(6):446-56. doi: 10.7150/jca.9140. eCollection 2014.
NDRG2 (N-myc downstream regulated gene 2) gene is involved in important biological processes: cell differentiation, growth and apoptosis. Several molecular studies have shown NDRG2 as a promising diagnostic marker involved in brain tumor pathology. The aim of the study was to investigate how changes in epigenetic modification and activity of NDRG2 reflect on glioma malignancy and patient outcome.
137 different malignancy grade gliomas were used as the study material: 14 pilocytic astrocytomas grade I, 45 diffuse astrocytomas grade II, 29 anaplastic astrocytomas grade III, and 49 grade IV astrocytomas (glioblastomas). Promoter methylation analysis has been carried out by using methylation-specific PCR, whereas RT-PCR and Western-blot analyses were used to measure NDRG2 expression levels.
We demonstrated that NDRG2 gene methylation frequency increased whereas expression at both mRNA and protein levels markedly decreased in glioblastoma specimens compared to the lower grade astrocytomas. NDRG2 transcript and protein levels did not correlate with the promoter methylation state, suggesting the presence of alternative regulatory gene expression mechanisms that may operate in a tissue-specific manner in gliomas. Kaplan-Meier analyses revealed significant differences in survival time in gliomas stratified by NDRG2 methylation status and mRNA and protein expression levels.
Our findings highlight the usefulness of combining epigenetic data to gene expression patterns at mRNA and protein level in tumor biomarker studies, and suggest that NDRG2 downregulation might bear influence on glioma tumor progression while being associated with higher malignancy grade.
NDRG2(神经母细胞瘤下调基因 2)基因参与重要的生物学过程:细胞分化、生长和凋亡。几项分子研究表明,NDRG2 是一种有前途的诊断标志物,参与脑肿瘤病理学。本研究旨在探讨表观遗传修饰和 NDRG2 活性的变化如何反映在神经胶质瘤的恶性程度和患者预后上。
使用 137 种不同恶性程度的神经胶质瘤作为研究材料:14 例毛细胞型星形细胞瘤 I 级、45 例弥漫性星形细胞瘤 II 级、29 例间变性星形细胞瘤 III 级和 49 例 IV 级星形细胞瘤(胶质母细胞瘤)。通过甲基化特异性 PCR 进行启动子甲基化分析,同时通过 RT-PCR 和 Western blot 分析测量 NDRG2 表达水平。
我们证明与低级别星形细胞瘤相比,胶质母细胞瘤标本中 NDRG2 基因的甲基化频率增加,而 mRNA 和蛋白质水平的表达则明显降低。NDRG2 转录本和蛋白质水平与启动子甲基化状态无关,这表明存在替代的基因表达调控机制,这些机制可能在神经胶质瘤中以组织特异性的方式发挥作用。Kaplan-Meier 分析显示,根据 NDRG2 甲基化状态以及 mRNA 和蛋白质表达水平对神经胶质瘤进行分层,生存时间存在显著差异。
我们的研究结果强调了在肿瘤生物标志物研究中将表观遗传数据与 mRNA 和蛋白质水平的基因表达模式相结合的有用性,并表明 NDRG2 的下调可能对神经胶质瘤的肿瘤进展产生影响,同时与更高的恶性程度相关。